Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 7839064 | . | A | C | CCDS7081.1:NM_005174.2:c.146aAa>aCa_NP_005165.1:p.49K>T | Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (ATP5C1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2w6e | 3 | P05631 | 91.95 | 0.0 |
X-RAY |
2009-10-27 | LYS | G:49 | G:24 | 63.0 | 0.315 | H | -76.8 | -47.3 | 57.0 | 0.285 | 0.03 |
E:P00829:0.03 |
|||||
| 2w6f | 3 | P05631 | 91.95 | 0.0 |
X-RAY |
2009-10-27 | LYS | G:49 | G:24 | 64.0 | 0.32 | H | -76.8 | -47.3 | 56.0 | 0.28 | 0.04 |
E:P00829:0.04 |
|||||
| 2w6g | 3 | P05631 | 91.95 | 0.0 |
X-RAY |
2009-10-27 | LYS | G:49 | G:24 | 51.0 | 0.255 | H | -65.6 | -49.2 | 35.0 | 0.175 | 0.08 |
E:P00829:0.08 |
|||||
| 2w6h | 3 | P05631 | 91.95 | 0.0 |
X-RAY |
2009-10-27 | LYS | G:49 | G:24 | 51.0 | 0.255 | H | -65.5 | -49.2 | 47.0 | 0.235 | 0.02 |
E:P00829:0.02 |
|||||
| 2w6i | 3 | P05631 | 91.95 | 0.0 |
X-RAY |
2009-10-27 | LYS | G:49 | G:24 | 51.0 | 0.255 | H | -65.5 | -49.3 | 43.0 | 0.215 | 0.04 |
E:P00829:0.04 |
|||||
| 2w6j | 3 | P05631 | 91.95 | 0.0 |
X-RAY |
2009-10-27 | LYS | G:49 | G:24 | 47.0 | 0.235 | H | -61.6 | -42.9 | 32.0 | 0.16 | 0.075 |
E:P00829:0.075 |
|||||
| 6tt7 | 3 | ? | 91.61 | 0.0 |
EM |
2020-09-23 | LYS | G:49 | G:24 | 44.0 | 0.22 | H | -65.8 | -42.2 | 15.0 | 0.075 | 0.145 |
D:W5PEP7:0.145 |
|||||
| 6j5i | 4 | A0A287A9I8 | 93.38 | 0.0 |
EM |
2019-06-26 | LYS | H:24 | G:24 | 47.0 | 0.235 | H | -76.1 | -32.9 | 20.0 | 0.1 | 0.135 |
E:K7GLT8:0.135 |
|||||
| 6j5j | 4 | A0A287A9I8 | 93.38 | 0.0 |
EM |
2019-06-26 | LYS | H:24 | G:24 | 69.0 | 0.345 | H | -94.1 | -38.7 | 60.0 | 0.3 | 0.045 |
E:K7GLT8:0.045 |
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| 6j5k | 4 | A0A287A9I8 | 93.38 | 0.0 |
EM |
2019-06-26 | LYS | H:24 | G:24 | 66.0 | 0.33 | H | -94.1 | -38.7 | 57.0 | 0.285 | 0.045 |
E:K7GLT8:0.045 |
|||||
| LYS | LA:24 | AG:24 | 68.0 | 0.34 | H | -94.1 | -38.7 | 58.0 | 0.29 | 0.05 |
IA:K7GLT8:0.05 |
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| LYS | PB:24 | BG:24 | 45.0 | 0.225 | H | -76.1 | -32.9 | 18.0 | 0.09 | 0.135 |
MB:K7GLT8:0.135 |
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| LYS | TC:24 | CG:24 | 45.0 | 0.225 | H | -76.0 | -32.9 | 19.0 | 0.095 | 0.13 |
QC:K7GLT8:0.13 |
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| 2jdi | 3 | P05631 | 91.58 | 0.0 |
X-RAY |
2007-03-13 | LYS | G:24 | G:24 | 55.0 | 0.275 | H | -67.0 | -33.5 | 39.0 | 0.195 | 0.08 |
E:P00829:0.08 |
HOH |
4.096 |
O |
O |
|
| 4asu | 3 | P05631 | 91.58 | 0.0 |
X-RAY |
2012-06-27 | LYS | G:24 | G:24 | 59.0 | 0.295 | H | -73.7 | -37.7 | 59.0 | 0.295 | 0.0 |
HOH |
9.558 |
CD |
O |
||
| 4tsf | 3 | P05631 | 91.58 | 0.0 |
X-RAY |
2014-08-06 | LYS | G:24 | G:24 | 40.0 | 0.2 | H | -64.1 | -43.0 | 17.0 | 0.085 | 0.115 |
E:P00829:0.115 |
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| 4tt3 | 3 | P05631 | 91.58 | 0.0 |
X-RAY |
2014-08-06 | LYS | G:24 | G:24 | 42.0 | 0.21 | H | -69.7 | -47.2 | 20.0 | 0.1 | 0.11 |
E:P00829:0.11 |
|||||
| 4yxw | 3 | P05631 | 91.58 | 0.0 |
X-RAY |
2015-05-06 | LYS | G:24 | G:24 | 30.0 | 0.15 | H | -70.3 | -29.1 | 26.0 | 0.13 | 0.02 |
E:P00829:0.02 |
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| 4z1m | 3 | P05631 | 91.58 | 0.0 |
X-RAY |
2015-05-06 | LYS | G:24 | G:24 | 42.0 | 0.21 | H | -70.1 | -47.2 | 19.0 | 0.095 | 0.115 |
E:P00829:0.115 |
|||||
| 5ara | 3 | P05631 | 91.58 | 0.0 |
EM |
2015-10-14 | LYS | G:24 | G:24 | 16.0 | NA | H | -63.3 | -47.0 | 16.0 | NA | NA | ||||||
| 5are | 3 | P05631 | 91.58 | 0.0 |
EM |
2015-10-14 | LYS | G:24 | G:24 | 17.0 | NA | H | -65.6 | -51.0 | 17.0 | NA | NA | ||||||
| 5arh | 3 | P05631 | 91.58 | 0.0 |
EM |
2015-10-14 | LYS | G:24 | G:24 | 13.0 | NA | H | -67.6 | -53.8 | 13.0 | NA | NA | ||||||
| 5ari | 3 | P05631 | 91.58 | 0.0 |
EM |
2015-10-14 | LYS | G:24 | G:24 | 18.0 | NA | H | -64.4 | -48.5 | 18.0 | NA | NA | ||||||
| 5fij | 3 | P05631 | 91.58 | 0.0 |
EM |
2015-10-14 | LYS | G:24 | G:24 | 12.0 | NA | H | -65.6 | -52.2 | 12.0 | NA | NA | ||||||
| 5fik | 3 | P05631 | 91.58 | 0.0 |
EM |
2015-10-14 | LYS | G:24 | G:24 | 15.0 | NA | H | -65.1 | -54.3 | 15.0 | NA | NA | ||||||
| 5fil | 3 | P05631 | 91.58 | 0.0 |
EM |
2015-10-14 | LYS | G:24 | G:24 | 16.0 | NA | H | -64.4 | -52.0 | 16.0 | NA | NA | ||||||
| 6yy0 | 3 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | G:24 | G:24 | 56.0 | 0.28 | H | -59.8 | -45.8 | 12.0 | 0.06 | 0.22 |
E:P00829:0.22 |
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| 6z1r | 3 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | G:24 | G:24 | 55.0 | 0.275 | H | -65.0 | -38.5 | 36.0 | 0.18 | 0.095 |
E:P00829:0.095 |
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| 6z1u | 3 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | G:24 | G:24 | 50.0 | 0.25 | H | -62.7 | -43.7 | 29.0 | 0.145 | 0.105 |
E:P00829:0.105 |
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| 6zg7 | 1 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | A:24 | G:24 | 63.0 | 0.315 | H | -63.6 | -42.5 | 63.0 | 0.315 | 0.0 | ||||||
| 6zg8 | 1 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | A:24 | G:24 | 72.0 | 0.36 | H | -59.8 | -44.2 | 72.0 | 0.36 | 0.0 | ||||||
| 6zik | 1 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | A:24 | G:24 | 57.0 | 0.285 | H | -61.6 | -41.6 | 57.0 | 0.285 | 0.0 | ||||||
| 6zpo | 4 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | H:24 | G:24 | 57.0 | 0.285 | H | -61.6 | -43.2 | 14.0 | 0.07 | 0.215 |
F:P00829:0.215 |
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| 6zqm | 3 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | G:24 | G:24 | 53.0 | 0.265 | H | -62.7 | -38.7 | 35.0 | 0.175 | 0.09 |
E:P00829:0.09 |
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| 6zqn | 3 | P05631 | 91.58 | 0.0 |
EM |
2020-09-09 | LYS | G:24 | G:24 | 53.0 | 0.265 | H | -62.5 | -43.2 | 28.0 | 0.14 | 0.125 |
E:P00829:0.125 |
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| 7ajb | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 21.0 | NA | H | -61.6 | -43.2 | 21.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 22.0 | NA | H | -61.7 | -43.2 | 22.0 | NA | NA | |||||||||||||
| 7ajc | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 22.0 | NA | H | -61.6 | -43.2 | 22.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 22.0 | NA | H | -62.7 | -38.7 | 22.0 | NA | NA | |||||||||||||
| 7ajd | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 22.0 | NA | H | -61.6 | -43.2 | 22.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 21.0 | NA | H | -62.5 | -43.2 | 21.0 | NA | NA | |||||||||||||
| 7aje | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 21.0 | NA | H | -62.7 | -38.7 | 21.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 22.0 | NA | H | -61.7 | -43.2 | 22.0 | NA | NA | |||||||||||||
| 7ajf | 3 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | G:24 | G:24 | 23.0 | NA | H | -63.2 | -37.5 | 23.0 | NA | NA | ||||||
| LYS | IA:24 | AG:24 | 21.0 | NA | H | -65.7 | -17.7 | 21.0 | NA | NA | |||||||||||||
| 7ajg | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 21.0 | NA | H | -62.8 | -38.6 | 21.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 21.0 | NA | H | -62.5 | -43.1 | 21.0 | NA | NA | |||||||||||||
| 7ajh | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 21.0 | NA | H | -62.5 | -43.1 | 21.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 22.0 | NA | H | -61.7 | -43.2 | 22.0 | NA | NA | |||||||||||||
| 7aji | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 22.0 | NA | H | -62.5 | -43.2 | 22.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 22.0 | NA | H | -62.7 | -38.7 | 22.0 | NA | NA | |||||||||||||
| 7ajj | 4 | P05631 | 91.58 | 0.0 |
EM |
2021-02-03 | LYS | H:24 | G:24 | 23.0 | NA | H | -62.5 | -43.1 | 23.0 | NA | NA | ||||||
| LYS | KA:24 | AG:24 | 23.0 | NA | H | -62.5 | -43.1 | 23.0 | NA | NA | |||||||||||||
| 2f43 | 3 | P35435 | 91.21 | 0.0 |
X-RAY |
2006-03-07 | LYS | C:24 | G:24 | 79.0 | 0.395 | H | -52.2 | -41.6 | NA | NA | NA | ||||||
| 1bmf | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
1996-12-07 | LYS | G:24 | G:24 | 63.0 | 0.315 | H | -76.8 | -47.2 | 57.0 | 0.285 | 0.03 |
E:P00829:0.03 |
HOH |
9.898 |
CE |
O |
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| 1cow | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
1996-08-17 | LYS | G:24 | G:24 | 67.0 | 0.335 | H | -74.2 | -47.3 | 56.0 | 0.28 | 0.055 |
E:P00829:0.055 |
HOH |
9.707 |
CE |
O |
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| 1e1q | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2000-06-28 | LYS | G:24 | G:24 | 78.0 | 0.39 | H | -70.1 | -39.0 | 58.0 | 0.29 | 0.1 |
E:P00829:0.1 |
HOH |
8.051 |
C |
O |
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| 1e1r | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2000-06-28 | LYS | G:24 | G:24 | 71.0 | 0.355 | H | -52.3 | -50.4 | 51.0 | 0.255 | 0.1 |
E:P00829:0.1 |
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| 1e79 | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2000-11-03 | LYS | G:24 | G:24 | 51.0 | 0.255 | H | -65.6 | -49.2 | 39.0 | 0.195 | 0.06 |
E:P00829:0.06 |
HOH |
7.878 |
N |
O |
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| 1efr | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
1997-02-12 | LYS | G:24 | G:24 | 65.0 | 0.325 | H | -68.9 | -46.9 | 58.0 | 0.29 | 0.035 |
E:P00829:0.035 |
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| 1h8e | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2001-08-10 | LYS | G:24 | G:24 | 48.0 | 0.24 | H | -66.0 | -47.8 | 48.0 | 0.24 | 0.0 |
HOH |
4.407 |
N |
O |
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| 1h8h | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2001-04-15 | LYS | G:24 | G:24 | 77.0 | 0.385 | H | -56.7 | -39.4 | 56.0 | 0.28 | 0.105 |
E:P00829:0.105 |
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| 1nbm | 4 | P05631 | 91.54 | 0.0 |
X-RAY |
1998-08-26 | LYS | G:24 | G:24 | 65.0 | 0.325 | H | -56.1 | -53.9 | 52.0 | 0.26 | 0.065 |
E:P00829:0.065 |
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| 1ohh | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2003-06-09 | LYS | G:24 | G:24 | 45.0 | 0.225 | H | -60.8 | -35.9 | 28.0 | 0.14 | 0.085 |
E:P00829:0.085 |
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| 1w0j | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2004-07-08 | LYS | G:24 | G:24 | 48.0 | 0.24 | H | -52.2 | -46.9 | 26.0 | 0.13 | 0.11 |
E:P00829:0.11 |
HOH |
8.388 |
C |
O |
|
| 1w0k | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2004-07-08 | LYS | G:24 | G:24 | 77.0 | 0.385 | H | -72.4 | -40.5 | 42.0 | 0.21 | 0.175 |
E:P00829:0.175 |
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| 2ck3 | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2006-05-08 | LYS | G:24 | G:24 | 47.0 | 0.235 | H | -61.7 | -42.9 | 27.0 | 0.135 | 0.1 |
E:P00829:0.1 |
HOH |
4.686 |
N |
O |
|
| 2jiz | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2007-08-21 | LYS | G:24 | G:24 | 46.0 | 0.23 | H | -55.0 | -38.6 | 30.0 | 0.15 | 0.08 |
E:P00829:0.08 |
HOH |
5.272 |
N |
O |
|
| LYS | N:24 | N:24 | 53.0 | 0.265 | H | -55.5 | -41.6 | NA | NA | NA | |||||||||||||
| 2jj1 | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2007-08-21 | LYS | G:24 | G:24 | 48.0 | 0.24 | H | -53.6 | -45.8 | 32.0 | 0.16 | 0.08 |
E:P00829:0.08 |
HOH |
7.230 |
NZ |
O |
|
| LYS | N:24 | N:24 | 52.0 | 0.26 | H | -53.7 | -47.5 | NA | NA | NA | |||||||||||||
| 2jj2 | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2007-08-21 | LYS | G:24 | G:24 | 47.0 | 0.235 | H | -56.4 | -40.5 | 25.0 | 0.125 | 0.11 |
E:P00829:0.11 |
HOH |
6.598 |
N |
O |
|
| LYS | N:24 | N:24 | 50.0 | 0.25 | H | -54.0 | -43.1 | NA | NA | NA | |||||||||||||
| 2v7q | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2007-09-18 | LYS | G:24 | G:24 | 45.0 | 0.225 | H | -66.6 | -45.8 | 21.0 | 0.105 | 0.12 |
E:P00829:0.12 |
HOH |
5.660 |
O |
O |
|
| 2wss | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2009-11-17 | LYS | G:24 | G:24 | 50.0 | 0.25 | H | -63.6 | -41.4 | 30.0 | 0.15 | 0.1 |
E:P00829:0.1 |
|||||
| LYS | P:24 | P:24 | 49.0 | 0.245 | H | -62.8 | -42.8 | NA | NA | NA | |||||||||||||
| 2xnd | 3 | P05631 | 91.54 | 0.0 |
X-RAY |
2010-09-15 | LYS | G:24 | G:24 | 44.0 | 0.22 | H | -73.3 | -44.4 | 20.0 | 0.1 | 0.12 |
E:P00829:0.12 |
|||||
| 1mab | 3 | P35435 | 90.74 | 0.0 |
X-RAY |
1998-09-30 | LYS | C:21 | G:21 | 79.0 | 0.395 | H | -52.9 | -40.1 | NA | NA | NA | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36542-f1 | 1 | P36542 | 100.0 | 0.0 | LYS | A:49 | A:49 | 75.0 | 0.375 | H | -58.2 | -47.8 | |