Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 81113515 . G A CCDS7358.1:NM_005729.3:c.541Gtg>Atg_NP_005720.1:p.181V>M Homo sapiens peptidylprolyl isomerase F (PPIF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2bit 1 P30405 99.39 3e-120 X-RAY
 2005-01-26 VAL A:139 X:139 1.0 0.006 H -60.2 -42.1 1.0 0.006 0.0 HOH
 5.433
 O
 O
2biu 1 P30405 99.39 3e-120 X-RAY
 2005-01-26 VAL A:139 X:139 1.0 0.006 H -59.0 -42.0 1.0 0.006 0.0 HOH
 5.583
 O
 O
4o8h 1 P30405 99.39 3e-120 X-RAY
 2014-06-11 VAL A:139 A:139 0.0 0.0 H -58.7 -42.5 0.0 0.0 0.0 HOH
 5.307
 O
 O
4o8i 1 P30405 99.39 3e-120 X-RAY
 2014-06-11 VAL A:139 A:139 1.0 0.006 H -58.7 -42.1 1.0 0.006 0.0 HOH
 5.502
 O
 O
5a0e 1 P30405 99.39 3e-120 X-RAY
 2015-12-30 VAL A:139 A:139 0.0 0.0 H -55.5 -44.2 0.0 0.0 0.0 HOH
 5.686
 CG1
 O
VAL B:139 B:139 1.0 0.006 H -58.1 -39.7 NA NA NA
3r49 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -62.1 -41.8 1.0 0.006 0.0 HOH
 5.488
 O
 O
3r4g 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -58.8 -42.8 1.0 0.006 0.0 HOH
 5.308
 O
 O
3r54 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 0.0 0.0 H -56.7 -42.2 0.0 0.0 0.0 HOH
 5.328
 O
 O
3r56 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -62.2 -41.5 1.0 0.006 0.0 HOH
 5.321
 O
 O
3r57 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -57.6 -43.3 1.0 0.006 0.0 N3M
HOH
 9.592
5.433
 CG2
O
 NAB
O
3r59 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -58.9 -42.2 1.0 0.006 0.0 HOH
 5.369
 O
 O
3rcf 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -58.7 -41.5 1.0 0.006 0.0 HOH
 5.357
 O
 O
3rcg 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -57.4 -42.6 1.0 0.006 0.0 HOH
 4.700
 O
 H1
3rci 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 X:181 1.0 0.006 H -58.1 -43.1 1.0 0.006 0.0 HOH
 5.457
 O
 O
3rck 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 X:181 1.0 0.006 H -59.1 -42.8 1.0 0.006 0.0 HOH
 5.607
 O
 O
3rcl 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 2.0 0.013 H -59.4 -41.9 2.0 0.013 0.0 HOH
 5.394
 O
 O
3rd9 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 X:181 1.0 0.006 H -59.4 -41.8 1.0 0.006 0.0 HOH
 5.334
 O
 O
3rda 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 X:181 1.0 0.006 H -57.7 -42.8 1.0 0.006 0.0 HOH
 5.631
 O
 O
3rdb 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 1.0 0.006 H -57.5 -42.5 1.0 0.006 0.0 HOH
 5.326
 O
 O
3rdc 1 P30405 99.39 3e-120 X-RAY
 2012-03-21 VAL A:140 A:181 2.0 0.013 H -59.7 -39.3 2.0 0.013 0.0 HOH
 5.363
 O
 O
2z6w 1 P30405 99.39 1e-119 X-RAY
 2008-04-29 VAL A:139 A:139 1.0 0.006 H -57.9 -42.9 1.0 0.006 0.0 HOH
 5.307
 O
 O
VAL B:139 B:139 0.0 0.0 H -56.7 -48.2 NA NA NA
5cbt 1 P30405 99.39 1e-119 X-RAY
 2016-07-20 VAL A:139 A:139 0.0 0.0 H -57.6 -39.3 0.0 0.0 0.0 HOH
 5.556
 O
 O
5cbu 1 P30405 99.39 1e-119 X-RAY
 2016-07-20 VAL A:139 A:139 0.0 0.0 H -58.9 -40.9 0.0 0.0 0.0 HOH
 5.544
 O
 O
5cbv 1 P30405 99.39 1e-119 X-RAY
 2016-07-20 VAL A:139 A:139 0.0 0.0 H -56.7 -42.9 0.0 0.0 0.0 HOH
 5.603
 O
 O
5cbw 1 P30405 99.39 1e-119 X-RAY
 2016-07-20 VAL A:139 A:139 0.0 0.0 H -60.9 -41.7 0.0 0.0 0.0 HOH
 5.622
 O
 O
5ccr 1 P30405 99.39 1e-119 X-RAY
 2016-07-20 VAL A:139 A:139 0.0 0.0 H -56.8 -41.1 0.0 0.0 0.0 HOH
 5.495
 O
 O
6y3e 1 P30405 99.39 1e-119 X-RAY
 2020-03-04 VAL A:139 A:139 0.0 0.0 H -59.7 -39.3 0.0 0.0 0.0 EDO
HOH
 7.611
5.476
 N
O
 O2
O
6ybm 1 P30405 99.39 1e-119 X-RAY
 2020-04-15 VAL A:139 A:139 0.0 0.0 H -61.1 -40.6 0.0 0.0 0.0 HOH
 5.482
 O
 O
VAL B:139 B:139 0.0 0.0 H -61.7 -41.6 0.0 0.0 0.0 HOH
 5.470
 O
 O
VAL C:139 C:139 0.0 0.0 H -62.4 -40.4 0.0 0.0 0.0 HOH
 5.410
 O
 O
3qyu 1 P30405 99.39 2e-119 X-RAY
 2011-08-24 VAL A:138 A:181 1.0 0.006 H -60.5 -39.2 1.0 0.006 0.0 HOH
 5.543
 O
 O
4j58 1 P30405 99.39 2e-119 X-RAY
 2014-02-19 VAL A:138 A:181 1.0 0.006 H -59.6 -42.5 1.0 0.006 0.0 HOH
 5.345
 O
 O
4j59 1 P30405 99.39 2e-119 X-RAY
 2014-02-19 VAL A:138 A:181 2.0 0.013 H -57.5 -37.6 2.0 0.013 0.0 HOH
 5.306
 O
 O
4j5a 1 P30405 99.39 2e-119 X-RAY
 2014-02-19 VAL A:138 X:181 1.0 0.006 H -58.7 -40.8 1.0 0.006 0.0 DMS
HOH
 6.936
5.527
 CG2
O
 O
O
4j5b 1 P30405 99.39 2e-119 X-RAY
 2014-02-19 VAL A:138 A:181 2.0 0.013 H -60.8 -42.4 2.0 0.013 0.0 HOH
 6.381
 C
 O
4j5c 1 P30405 99.39 2e-119 X-RAY
 2014-02-19 VAL A:138 X:181 1.0 0.006 H -59.2 -41.6 1.0 0.006 0.0 HOH
 5.363
 O
 O
4j5d 1 P30405 99.39 2e-119 X-RAY
 2014-02-19 VAL A:138 X:181 1.0 0.006 H -59.5 -41.0 1.0 0.006 0.0 HOH
 5.361
 O
 O
4j5e 1 P30405 99.39 2e-119 X-RAY
 2014-02-19 VAL A:138 X:181 1.0 0.006 H -58.3 -41.0 1.0 0.006 0.0 HOH
 5.343
 O
 O
4xnc 1 P30405 99.39 2e-119 X-RAY
 2015-08-12 VAL A:138 A:181 3.0 0.019 H -67.6 -39.6 3.0 0.019 0.0 HOH
 5.403
 O
 O
4zsc 1 P30405 99.39 2e-119 X-RAY
 2015-08-12 VAL A:138 A:181 1.0 0.006 H -60.4 -39.8 1.0 0.006 0.0 HOH
 5.628
 O
 O
4zsd 1 P30405 99.39 2e-119 X-RAY
 2015-08-12 VAL A:138 A:181 1.0 0.006 H -60.2 -40.2 1.0 0.006 0.0 HOH
 5.554
 O
 O
5ccn 1 P30405 99.39 2e-119 X-RAY
 2016-07-20 VAL A:138 A:139 0.0 0.0 H -56.3 -41.9 0.0 0.0 0.0 HOH
 5.587
 O
 O
5ccq 1 P30405 99.39 2e-119 X-RAY
 2016-07-20 VAL A:138 A:139 0.0 0.0 H -56.9 -43.3 0.0 0.0 0.0 HOH
 5.549
 O
 O
6r8l 1 P30405 99.39 2e-119 X-RAY
 2019-11-27 VAL A:138 A:181 1.0 0.006 H -61.7 -40.6 1.0 0.006 0.0 HOH
 5.438
 O
 O
6r8o 1 P30405 99.39 2e-119 X-RAY
 2019-11-27 VAL A:138 A:181 1.0 0.006 H -63.4 -41.3 1.0 0.006 0.0 SO4
HOH
 7.028
5.418
 N
O
 O1
O
6r8w 1 P30405 99.39 2e-119 X-RAY
 2019-11-27 VAL A:138 A:181 1.0 0.006 H -63.5 -37.4 1.0 0.006 0.0 HOH
 5.497
 O
 O
6r9s 1 P30405 99.39 2e-119 X-RAY
 2019-11-27 VAL A:138 A:181 1.0 0.006 H -57.9 -40.8 1.0 0.006 0.0 SO4
HOH
 7.323
5.421
 N
O
 O1
O
6r9u 1 P30405 99.39 2e-119 X-RAY
 2019-11-27 VAL A:138 A:181 1.0 0.006 H -59.7 -42.3 1.0 0.006 0.0 HOH
 5.498
 O
 O
6r9x 1 P30405 99.39 2e-119 X-RAY
 2019-11-27 VAL A:138 A:181 1.0 0.006 H -59.1 -41.9 1.0 0.006 0.0 HOH
 5.357
 O
 O
6ra1 1 P30405 99.39 2e-119 X-RAY
 2019-11-27 VAL A:138 A:181 0.0 0.0 H -62.6 -40.0 0.0 0.0 0.0 HOH
 6.325
 CG1
 O
5ccs 1 P30405 98.78 3e-119 X-RAY
 2016-07-20 VAL A:139 X:139 0.0 0.0 H -60.1 -39.8 0.0 0.0 0.0 HOH
 5.264
 O
 O
4tot 1 P29117 96.32 7e-116 X-RAY
 2014-11-12 VAL A:139 A:139 1.0 0.006 H -64.2 -41.0 1.0 0.006 0.0 HOH
 5.681
 O
 O
VAL B:139 B:139 1.0 0.006 H -64.5 -40.5 NA NA NA
VAL C:139 C:139 1.0 0.006 H -63.9 -41.1 NA NA NA
VAL D:139 D:139 1.0 0.006 H -64.4 -40.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p30405-f1 1 P30405 100.0 5e-154 VAL A:181 A:181 0.0 0.0 H -59.8 -40.7