Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 98080388 . T A CCDS7447.1:NM_004088.3:c.521aTa>aAa_NP_004079.3:p.174I>K Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jms 1 P09838 81.27 0.0 X-RAY
 2002-01-23 ILE A:45 A:174 30.0 0.171 H -58.9 -47.8 30.0 0.171 0.0 HOH
 3.684
 CG1
 O
4iqt 1 P09838 81.27 0.0 X-RAY
 2013-09-04 ILE A:45 A:174 30.0 0.171 H -68.8 -45.6 30.0 0.171 0.0 1FO
HOH
 9.585
3.288
 N
CD1
 OAD
O
4iqu 1 P09838 81.27 0.0 X-RAY
 2013-09-04 ILE A:45 A:174 31.0 0.177 H -68.3 -44.3 31.0 0.177 0.0 HOH
 3.770
 CG1
 O
4i27 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 32.0 0.183 H -64.8 -46.3 32.0 0.183 0.0 HOH
 3.320
 CD1
 O
4i28 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 31.0 0.177 H -65.3 -45.3 31.0 0.177 0.0 HOH
 3.370
 CD1
 O
4i29 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 31.0 0.177 H -70.1 -45.1 31.0 0.177 0.0 HOH
 3.466
 CD1
 O
4i2a 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 31.0 0.177 H -68.1 -45.4 31.0 0.177 0.0 HOH
 3.418
 CD1
 O
4i2b 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 30.0 0.171 H -67.7 -44.5 30.0 0.171 0.0 HOH
 3.476
 CD1
 O
4i2c 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 30.0 0.171 H -65.7 -44.8 30.0 0.171 0.0 HOH
 3.506
 CD1
 O
4i2d 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 30.0 0.171 H -69.6 -45.2 30.0 0.171 0.0 HOH
 3.328
 CD1
 O
4i2e 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 31.0 0.177 H -68.0 -46.1 31.0 0.177 0.0 HOH
 3.412
 CD1
 O
4i2f 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 31.0 0.177 H -66.4 -45.2 31.0 0.177 0.0 HOH
 3.595
 CG1
 O
4i2g 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 30.0 0.171 H -65.7 -46.5 30.0 0.171 0.0 HOH
 3.699
 CG1
 O
4i2h 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 33.0 0.189 H -68.2 -45.0 33.0 0.189 0.0 HOH
 3.320
 CG1
 O
4i2i 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 35.0 0.2 H -62.9 -46.6 35.0 0.2 0.0 HOH
 7.826
 CG2
 O
4i2j 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ILE A:64 A:174 32.0 0.183 H -69.0 -44.4 32.0 0.183 0.0 HOH
 3.489
 CG1
 O
4qz8 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 31.0 0.177 H -69.0 -44.4 31.0 0.177 0.0 HOH
 7.304
 N
 O
4qz9 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 30.0 0.171 H -66.9 -45.5 30.0 0.171 0.0 HOH
 3.358
 CG1
 O
4qza 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 30.0 0.171 H -68.6 -45.1 30.0 0.171 0.0 HOH
 3.317
 CG1
 O
4qzb 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 30.0 0.171 H -67.0 -45.2 30.0 0.171 0.0 HOH
 3.330
 CG1
 O
5d46 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 ILE A:64 A:174 26.0 0.149 H -66.4 -52.3 26.0 0.149 0.0 HOH
 8.504
 CG1
 O
5d49 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 ILE A:64 A:174 29.0 0.166 H -65.3 -43.6 29.0 0.166 0.0 HOH
 3.406
 CD1
 O
5d4b 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 ILE A:64 A:174 25.0 0.143 H -72.4 -47.4 25.0 0.143 0.0 HOH
 9.413
 N
 O
ILE B:64 B:174 31.0 0.177 H -73.6 -44.0 NA NA NA
4iqw 1 P09838 81.0 0.0 X-RAY
 2013-09-04 ILE A:45 A:174 31.0 0.177 H -65.4 -44.9 31.0 0.177 0.0 HOH
 3.934
 CG1
 O
4iqv 1 P09838 81.0 0.0 X-RAY
 2013-09-04 ILE A:45 A:174 31.0 0.177 H -67.1 -45.7 31.0 0.177 0.0 1FO
HOH
 9.038
5.526
 N
CD1
 OAB
O
4qzc 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 31.0 0.177 H -68.5 -46.4 31.0 0.177 0.0 HOH
 3.373
 CG1
 O
4qzd 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 31.0 0.177 H -68.6 -45.2 31.0 0.177 0.0 HOH
 7.599
 N
 O
4qze 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 31.0 0.177 H -67.5 -46.0 31.0 0.177 0.0 HOH
 3.357
 CD1
 O
4qzf 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 31.0 0.177 H -68.2 -45.0 31.0 0.177 0.0 HOH
 7.355
 O
 O
4qzg 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 30.0 0.171 H -69.8 -46.5 30.0 0.171 0.0 HOH
 4.572
 CD1
 O
4qzh 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 30.0 0.171 H -68.8 -46.0 30.0 0.171 0.0 HOH
 5.267
 CD1
 O
4qzi 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ILE A:64 A:174 33.0 0.189 H -70.2 -44.0 33.0 0.189 0.0 HOH
 7.514
 N
 O
1kdh 2 12802443 82.92 0.0 X-RAY
 2002-05-13 ILE B:27 A:174 30.0 0.171 H -69.1 -58.6 30.0 0.171 0.0
1kej 1 P09838 82.92 0.0 X-RAY
 2002-05-16 ILE A:27 A:174 29.0 0.166 H -76.5 -52.8 29.0 0.166 0.0 HOH
 3.374
 CD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04053-f1 1 P04053 100.0 0.0 ILE A:174 A:174 30.0 0.171 H -62.7 -46.3