Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 98087284 | . | A | C | CCDS7447.1:NM_004088.3:c.934Agt>Cgt_NP_004079.3:p.312S>R | Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1jms | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2002-01-23 | SER | A:183 | A:312 | 4.0 | 0.035 | H | -53.1 | -47.8 | 4.0 | 0.035 | 0.0 |
HOH |
3.100 |
OG |
O |
||
| 4iqt | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | SER | A:183 | A:312 | 3.0 | 0.026 | H | -54.2 | -43.7 | 3.0 | 0.026 | 0.0 |
1FO HOH |
9.676 5.664 |
CB OG |
FAF O |
||
| 4iqu | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | SER | A:183 | A:312 | 4.0 | 0.035 | H | -54.2 | -44.2 | 4.0 | 0.035 | 0.0 |
HOH |
3.209 |
OG |
O |
||
| 4i27 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -54.6 | -44.1 | 4.0 | 0.035 | 0.0 |
HOH |
2.637 |
OG |
O |
||
| 4i28 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 2.0 | 0.017 | H | -54.2 | -43.9 | 2.0 | 0.017 | 0.0 |
HOH |
2.887 |
OG |
O |
||
| 4i29 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 3.0 | 0.026 | H | -52.8 | -43.4 | 3.0 | 0.026 | 0.0 |
HOH |
2.620 |
OG |
O |
||
| 4i2a | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -55.6 | -43.0 | 4.0 | 0.035 | 0.0 |
HOH |
2.737 |
OG |
O |
||
| 4i2b | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -54.9 | -43.1 | 4.0 | 0.035 | 0.0 |
HOH |
2.722 |
OG |
O |
||
| 4i2c | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -55.6 | -40.6 | 4.0 | 0.035 | 0.0 |
HOH |
2.910 |
OG |
O |
||
| 4i2d | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -54.5 | -43.1 | 4.0 | 0.035 | 0.0 |
HOH |
3.093 |
OG |
O |
||
| 4i2e | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 3.0 | 0.026 | H | -55.1 | -43.2 | 3.0 | 0.026 | 0.0 |
HOH |
2.687 |
OG |
O |
||
| 4i2f | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -54.8 | -41.7 | 4.0 | 0.035 | 0.0 |
HOH |
2.848 |
OG |
O |
||
| 4i2g | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -54.6 | -43.7 | 4.0 | 0.035 | 0.0 |
HOH |
3.644 |
OG |
O |
||
| 4i2h | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 5.0 | 0.043 | H | -54.1 | -43.3 | 5.0 | 0.043 | 0.0 |
HOH |
3.255 |
OG |
O |
||
| 4i2i | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 3.0 | 0.026 | H | -53.6 | -44.2 | 3.0 | 0.026 | 0.0 |
HOH |
2.950 |
OG |
O |
||
| 4i2j | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | SER | A:202 | A:312 | 4.0 | 0.035 | H | -54.6 | -41.9 | 4.0 | 0.035 | 0.0 |
HOH |
5.597 |
OG |
O |
||
| 4qz8 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 6.0 | 0.052 | H | -54.4 | -44.4 | 6.0 | 0.052 | 0.0 |
HOH |
8.343 |
OG |
O |
||
| 4qz9 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 10.0 | 0.087 | H | -54.6 | -44.0 | 10.0 | 0.087 | 0.0 |
HOH |
2.867 |
OG |
O |
||
| 4qza | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 5.0 | 0.043 | H | -53.3 | -44.8 | 5.0 | 0.043 | 0.0 |
HOH |
2.783 |
OG |
O |
||
| 4qzb | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 6.0 | 0.052 | H | -53.6 | -44.9 | 6.0 | 0.052 | 0.0 |
HOH |
2.867 |
OG |
O |
||
| 5d46 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | SER | A:202 | A:312 | 37.0 | 0.322 | H | -59.8 | -22.1 | 37.0 | 0.322 | 0.0 |
HOH |
4.302 |
OG |
O |
||
| 5d49 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | SER | A:202 | A:312 | 9.0 | 0.078 | H | -58.7 | -44.5 | 9.0 | 0.078 | 0.0 |
HOH |
2.694 |
OG |
O |
||
| 5d4b | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | SER | A:202 | A:312 | 10.0 | 0.087 | H | -56.4 | -46.4 | 10.0 | 0.087 | 0.0 |
HOH |
5.179 |
OG |
O |
||
| SER | B:202 | B:312 | 5.0 | 0.043 | H | -51.7 | -49.5 | NA | NA | NA | |||||||||||||
| 4iqw | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | SER | A:183 | A:312 | 4.0 | 0.035 | H | -53.8 | -41.9 | 4.0 | 0.035 | 0.0 |
HOH |
3.203 |
OG |
O |
||
| 4iqv | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | SER | A:183 | A:312 | 5.0 | 0.043 | H | -55.9 | -42.6 | 5.0 | 0.043 | 0.0 |
1FO HOH |
9.345 3.642 |
CB OG |
FAF O |
||
| 4qzc | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 3.0 | 0.026 | H | -55.7 | -43.3 | 3.0 | 0.026 | 0.0 |
HOH |
5.199 |
OG |
O |
||
| 4qzd | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 11.0 | 0.096 | H | -55.7 | -42.4 | 11.0 | 0.096 | 0.0 |
HOH |
3.421 |
CB |
O |
||
| 4qze | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 6.0 | 0.052 | H | -54.6 | -44.1 | 6.0 | 0.052 | 0.0 |
HOH |
4.869 |
OG |
O |
||
| 4qzf | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 13.0 | 0.113 | H | -55.0 | -42.8 | 13.0 | 0.113 | 0.0 |
HOH |
3.800 |
OG |
O |
||
| 4qzg | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 5.0 | 0.043 | H | -55.2 | -44.7 | 5.0 | 0.043 | 0.0 |
HOH |
5.566 |
C |
O |
||
| 4qzh | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 29.0 | 0.252 | H | -54.8 | -41.6 | 29.0 | 0.252 | 0.0 |
HOH |
3.192 |
OG |
O |
||
| 4qzi | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | SER | A:202 | A:312 | 5.0 | 0.043 | H | -54.0 | -44.5 | 5.0 | 0.043 | 0.0 |
HOH |
7.352 |
OG |
O |
||
| 1kdh | 2 | 12802443 | 82.92 | 0.0 |
X-RAY |
2002-05-13 | SER | B:165 | A:312 | 4.0 | 0.035 | H | -48.7 | -35.3 | 4.0 | 0.035 | 0.0 | ||||||
| 1kej | 1 | P09838 | 82.92 | 0.0 |
X-RAY |
2002-05-16 | SER | A:165 | A:312 | 6.0 | 0.052 | H | -56.0 | -53.2 | 6.0 | 0.052 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04053-f1 | 1 | P04053 | 100.0 | 0.0 | SER | A:312 | A:312 | 3.0 | 0.026 | H | -57.6 | -42.9 | |