Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 98087332 | . | G | A | CCDS7447.1:NM_004088.3:c.982Gtc>Atc_NP_004079.3:p.328V>I | Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1jms | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2002-01-23 | VAL | A:199 | A:328 | 26.0 | 0.168 | E | -119.5 | 117.2 | 26.0 | 0.168 | 0.0 |
HOH |
3.194 |
O |
O |
||
| 4iqt | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:199 | A:328 | 21.0 | 0.135 | E | -112.3 | 125.1 | 21.0 | 0.135 | 0.0 |
HOH |
3.271 |
N |
O |
||
| 4iqu | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:199 | A:328 | 21.0 | 0.135 | E | -115.4 | 123.2 | 21.0 | 0.135 | 0.0 |
HOH |
3.663 |
N |
O |
||
| 4i27 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 22.0 | 0.142 | E | -113.8 | 120.9 | 22.0 | 0.142 | 0.0 |
HOH |
3.471 |
O |
O |
||
| 4i28 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 23.0 | 0.148 | E | -121.4 | 120.8 | 23.0 | 0.148 | 0.0 |
HOH |
3.478 |
O |
O |
||
| 4i29 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 21.0 | 0.135 | E | -115.0 | 123.5 | 21.0 | 0.135 | 0.0 |
HOH |
3.212 |
N |
O |
||
| 4i2a | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 21.0 | 0.135 | E | -115.4 | 122.9 | 21.0 | 0.135 | 0.0 |
HOH |
3.103 |
N |
O |
||
| 4i2b | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 20.0 | 0.129 | E | -114.6 | 122.8 | 20.0 | 0.129 | 0.0 |
HOH |
3.373 |
O |
O |
||
| 4i2c | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 20.0 | 0.129 | E | -115.9 | 120.3 | 20.0 | 0.129 | 0.0 |
HOH |
3.290 |
N |
O |
||
| 4i2d | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 20.0 | 0.129 | E | -115.1 | 123.5 | 20.0 | 0.129 | 0.0 |
HOH |
2.969 |
N |
O |
||
| 4i2e | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 20.0 | 0.129 | E | -116.0 | 122.0 | 20.0 | 0.129 | 0.0 |
HOH |
3.123 |
N |
O |
||
| 4i2f | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 21.0 | 0.135 | E | -117.9 | 121.8 | 21.0 | 0.135 | 0.0 |
HOH |
3.191 |
N |
O |
||
| 4i2g | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 18.0 | 0.116 | E | -114.1 | 121.3 | 18.0 | 0.116 | 0.0 |
HOH |
3.507 |
N |
O |
||
| 4i2h | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 22.0 | 0.142 | E | -115.1 | 118.9 | 22.0 | 0.142 | 0.0 |
HOH |
4.120 |
N |
O |
||
| 4i2i | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 20.0 | 0.129 | E | -119.7 | 121.0 | 20.0 | 0.129 | 0.0 |
HOH |
3.437 |
N |
O |
||
| 4i2j | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:218 | A:328 | 23.0 | 0.148 | E | -114.9 | 121.9 | 23.0 | 0.148 | 0.0 |
HOH |
4.473 |
O |
O |
||
| 4qz8 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 26.0 | 0.168 | E | -114.3 | 123.8 | 26.0 | 0.168 | 0.0 |
HOH |
7.124 |
O |
O |
||
| 4qz9 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 22.0 | 0.142 | E | -112.0 | 125.4 | 22.0 | 0.142 | 0.0 |
HOH |
2.928 |
N |
O |
||
| 4qza | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 24.0 | 0.155 | E | -112.3 | 123.3 | 24.0 | 0.155 | 0.0 |
HOH |
3.051 |
N |
O |
||
| 4qzb | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 24.0 | 0.155 | E | -112.5 | 125.4 | 24.0 | 0.155 | 0.0 |
HOH |
3.010 |
N |
O |
||
| 5d46 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | VAL | A:218 | A:328 | 47.0 | 0.303 | E | -118.6 | 117.8 | 47.0 | 0.303 | 0.0 |
HOH |
3.331 |
O |
O |
||
| 5d49 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | VAL | A:218 | A:328 | 15.0 | 0.097 | E | -118.1 | 119.2 | 15.0 | 0.097 | 0.0 |
HOH |
3.143 |
O |
O |
||
| 5d4b | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | VAL | A:218 | A:328 | 19.0 | 0.123 | E | -110.7 | 122.9 | 19.0 | 0.123 | 0.0 |
HOH |
4.731 |
O |
O |
||
| VAL | B:218 | B:328 | 18.0 | 0.116 | E | -110.3 | 123.4 | NA | NA | NA | |||||||||||||
| 4iqw | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:199 | A:328 | 19.0 | 0.123 | E | -116.4 | 122.9 | 19.0 | 0.123 | 0.0 |
HOH |
3.585 |
N |
O |
||
| 4iqv | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:199 | A:328 | 13.0 | 0.084 | E | -112.6 | 124.1 | 13.0 | 0.084 | 0.0 |
HOH |
3.537 |
N |
O |
||
| 4qzc | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 22.0 | 0.142 | E | -113.2 | 121.3 | 22.0 | 0.142 | 0.0 |
HOH |
2.977 |
N |
O |
||
| 4qzd | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 21.0 | 0.135 | E | -113.4 | 120.6 | 21.0 | 0.135 | 0.0 |
HOH |
3.699 |
N |
O |
||
| 4qze | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 22.0 | 0.142 | E | -115.0 | 122.0 | 22.0 | 0.142 | 0.0 |
HOH |
3.735 |
O |
O |
||
| 4qzf | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 17.0 | 0.11 | E | -113.4 | 124.1 | 17.0 | 0.11 | 0.0 |
HOH |
6.085 |
O |
O |
||
| 4qzg | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 20.0 | 0.129 | E | -114.6 | 122.7 | 20.0 | 0.129 | 0.0 | ||||||
| 4qzh | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 39.0 | 0.252 | E | -114.7 | 120.5 | 39.0 | 0.252 | 0.0 |
HOH |
3.426 |
N |
O |
||
| 4qzi | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:218 | A:328 | 25.0 | 0.161 | E | -116.5 | 119.1 | 25.0 | 0.161 | 0.0 |
HOH |
3.713 |
N |
O |
||
| 1kdh | 2 | 12802443 | 82.92 | 0.0 |
X-RAY |
2002-05-13 | VAL | B:181 | A:328 | 25.0 | 0.161 | E | -110.7 | 101.6 | 25.0 | 0.161 | 0.0 | ||||||
| 1kej | 1 | P09838 | 82.92 | 0.0 |
X-RAY |
2002-05-16 | VAL | A:181 | A:328 | 25.0 | 0.161 | E | -104.4 | 117.9 | 25.0 | 0.161 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04053-f1 | 1 | P04053 | 100.0 | 0.0 | VAL | A:328 | A:328 | 14.0 | 0.09 | E | -117.1 | 110.0 | |