Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 98088565 | . | T | A | CCDS7447.1:NM_004088.3:c.1091gTg>gAg_NP_004079.3:p.364V>E | Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1jms | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2002-01-23 | VAL | A:236 | A:365 | 1.0 | 0.006 | H | -53.7 | -44.5 | 1.0 | 0.006 | 0.0 |
HOH |
7.246 |
CG2 |
O |
||
| 4iqt | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:236 | A:365 | 0.0 | 0.0 | H | -65.5 | -41.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.728 |
CG1 |
O |
||
| 4iqu | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:236 | A:365 | 0.0 | 0.0 | H | -65.3 | -41.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.848 |
CG1 |
O |
||
| 4i27 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -67.8 | -43.8 | 0.0 | 0.0 | 0.0 |
HOH |
7.556 |
CG2 |
O |
||
| 4i28 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.8 | -45.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.976 |
N |
O |
||
| 4i29 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -64.3 | -43.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.458 |
CG1 |
O |
||
| 4i2a | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.6 | -42.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.877 |
N |
O |
||
| 4i2b | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.7 | -43.1 | 0.0 | 0.0 | 0.0 |
HOH |
5.003 |
N |
O |
||
| 4i2c | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.6 | -43.3 | 0.0 | 0.0 | 0.0 |
HOH |
4.973 |
N |
O |
||
| 4i2d | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -64.9 | -43.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.337 |
C |
O |
||
| 4i2e | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.6 | -43.0 | 0.0 | 0.0 | 0.0 |
HOH |
5.084 |
N |
O |
||
| 4i2f | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.1 | -42.5 | 0.0 | 0.0 | 0.0 |
HOH |
5.015 |
N |
O |
||
| 4i2g | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.6 | -42.7 | 0.0 | 0.0 | 0.0 |
HOH |
6.929 |
O |
O |
||
| 4i2h | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -62.6 | -43.7 | 0.0 | 0.0 | 0.0 |
HOH |
7.518 |
N |
O |
||
| 4i2i | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.8 | -44.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.694 |
O |
O |
||
| 4i2j | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | VAL | A:255 | A:365 | 1.0 | 0.006 | H | -64.7 | -44.5 | 1.0 | 0.006 | 0.0 |
HOH |
7.073 |
O |
O |
||
| 4qz8 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 8.0 | 0.052 | H | -65.4 | -42.3 | 8.0 | 0.052 | 0.0 | ||||||
| 4qz9 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -66.0 | -43.5 | 0.0 | 0.0 | 0.0 |
HOH |
4.871 |
N |
O |
||
| 4qza | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.3 | -43.6 | 0.0 | 0.0 | 0.0 |
HOH |
4.785 |
N |
O |
||
| 4qzb | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 1.0 | 0.006 | H | -65.7 | -44.4 | 1.0 | 0.006 | 0.0 |
HOH |
4.932 |
N |
O |
||
| 5d46 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | VAL | A:255 | A:365 | 21.0 | NA | H | -71.4 | -35.1 | 21.0 | NA | NA |
HOH |
5.670 |
O |
O |
||
| 5d49 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -69.1 | -44.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.722 |
N |
O |
||
| 5d4b | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | VAL | A:255 | A:365 | 1.0 | 0.006 | H | -69.9 | -43.4 | 1.0 | 0.006 | 0.0 | ||||||
| VAL | B:255 | B:365 | 2.0 | 0.013 | H | -69.8 | -44.1 | NA | NA | NA | |||||||||||||
| 4iqw | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:236 | A:365 | 0.0 | 0.0 | H | -64.8 | -42.1 | 0.0 | 0.0 | 0.0 |
HOH |
6.879 |
CG1 |
O |
||
| 4iqv | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | VAL | A:236 | A:365 | 0.0 | 0.0 | H | -65.1 | -43.2 | 0.0 | 0.0 | 0.0 |
HOH |
6.745 |
O |
O |
||
| 4qzc | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 10.0 | NA | H | -64.2 | -42.2 | 10.0 | NA | NA |
HOH |
7.701 |
O |
O |
||
| 4qzd | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 4.0 | 0.026 | H | -65.0 | -42.3 | 4.0 | 0.026 | 0.0 |
HOH |
9.948 |
CG2 |
O |
||
| 4qze | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.1 | -40.7 | 0.0 | 0.0 | 0.0 |
HOH |
5.286 |
N |
O |
||
| 4qzf | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 5.0 | 0.032 | H | -64.2 | -43.4 | 5.0 | 0.032 | 0.0 | ||||||
| 4qzg | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.7 | -41.1 | 0.0 | 0.0 | 0.0 |
HOH |
7.970 |
O |
O |
||
| 4qzh | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.2 | -42.8 | 0.0 | 0.0 | 0.0 | ||||||
| 4qzi | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | VAL | A:255 | A:365 | 0.0 | 0.0 | H | -65.4 | -41.3 | 0.0 | 0.0 | 0.0 |
HOH |
8.398 |
O |
O |
||
| 1kdh | 2 | 12802443 | 82.92 | 0.0 |
X-RAY |
2002-05-13 | VAL | B:218 | A:365 | 0.0 | 0.0 | H | -69.9 | -52.6 | 0.0 | 0.0 | 0.0 | ||||||
| 1kej | 1 | P09838 | 82.92 | 0.0 |
X-RAY |
2002-05-16 | VAL | A:218 | A:365 | 6.0 | 0.039 | H | -64.8 | -40.6 | 6.0 | 0.039 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04053-f1 | 1 | P04053 | 100.0 | 0.0 | VAL | A:364 | A:364 | 0.0 | 0.0 | H | -62.1 | -46.6 | |