Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 98088583 | . | A | C | CCDS7447.1:NM_004088.3:c.1109aAg>aCg_NP_004079.3:p.370K>T | Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1jms | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2002-01-23 | GLN | A:242 | A:371 | 153.0 | 0.85 | H | -55.0 | -36.2 | 153.0 | 0.85 | 0.0 | ||||||
| 4iqt | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | GLN | A:242 | A:371 | 161.0 | 0.894 | H | -64.7 | -34.6 | 161.0 | 0.894 | 0.0 |
HOH |
5.553 |
N |
O |
||
| 4iqu | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | GLN | A:242 | A:371 | 160.0 | 0.889 | H | -63.3 | -36.4 | 160.0 | 0.889 | 0.0 |
HOH |
3.389 |
O |
O |
||
| 4i27 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 156.0 | 0.867 | H | -62.6 | -35.2 | 156.0 | 0.867 | 0.0 |
HOH |
9.389 |
NE2 |
O |
||
| 4i28 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 156.0 | 0.867 | H | -61.3 | -40.9 | 156.0 | 0.867 | 0.0 |
HOH |
3.548 |
NE2 |
O |
||
| 4i29 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 156.0 | 0.867 | H | -63.4 | -35.5 | 156.0 | 0.867 | 0.0 |
HOH |
5.248 |
N |
O |
||
| 4i2a | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 154.0 | 0.856 | H | -63.3 | -37.0 | 154.0 | 0.856 | 0.0 |
HOH |
3.621 |
NE2 |
O |
||
| 4i2b | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 151.0 | 0.839 | H | -64.5 | -36.3 | 151.0 | 0.839 | 0.0 |
HOH |
3.573 |
NE2 |
O |
||
| 4i2c | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 154.0 | 0.856 | H | -64.2 | -35.6 | 154.0 | 0.856 | 0.0 |
HOH |
3.429 |
NE2 |
O |
||
| 4i2d | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 156.0 | 0.867 | H | -63.5 | -39.2 | 156.0 | 0.867 | 0.0 |
HOH |
8.726 |
N |
O |
||
| 4i2e | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 112.0 | NA | H | -65.8 | -34.2 | 112.0 | NA | NA |
HOH |
5.432 |
N |
O |
||
| 4i2f | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 153.0 | 0.85 | H | -64.1 | -36.7 | 153.0 | 0.85 | 0.0 |
HOH |
3.475 |
NE2 |
O |
||
| 4i2g | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 153.0 | 0.85 | H | -65.4 | -35.6 | 153.0 | 0.85 | 0.0 |
HOH |
7.363 |
O |
O |
||
| 4i2h | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 92.0 | NA | H | -66.8 | -36.3 | 92.0 | NA | NA |
HOH |
6.303 |
N |
O |
||
| 4i2i | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 157.0 | 0.872 | H | -61.1 | -37.1 | 157.0 | 0.872 | 0.0 |
HOH |
3.578 |
O |
O |
||
| 4i2j | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | GLN | A:261 | A:371 | 93.0 | NA | H | -65.0 | -36.4 | 93.0 | NA | NA |
HOH |
5.360 |
O |
O |
||
| 4qz8 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 147.0 | 0.817 | H | -62.8 | -38.5 | 147.0 | 0.817 | 0.0 | ||||||
| 4qz9 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 159.0 | 0.883 | H | -60.7 | -29.9 | 159.0 | 0.883 | 0.0 |
HOH |
2.724 |
O |
O |
||
| 4qza | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 160.0 | 0.889 | H | -61.0 | -30.2 | 160.0 | 0.889 | 0.0 |
HOH |
2.773 |
O |
O |
||
| 4qzb | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 160.0 | 0.889 | H | -63.4 | -28.0 | 160.0 | 0.889 | 0.0 |
HOH |
2.719 |
O |
O |
||
| 5d46 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | GLN | A:261 | A:371 | 75.0 | NA | H | -66.6 | -33.3 | 75.0 | NA | NA |
HOH |
7.049 |
N |
O |
||
| 5d49 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | GLN | A:261 | A:371 | 160.0 | 0.889 | H | -61.4 | -32.5 | 160.0 | 0.889 | 0.0 |
HOH |
3.410 |
O |
O |
||
| 5d4b | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | GLN | A:261 | A:371 | 164.0 | 0.911 | H | -66.1 | -32.4 | 164.0 | 0.911 | 0.0 |
HOH |
7.746 |
O |
O |
||
| GLN | B:261 | B:371 | 90.0 | NA | H | -66.5 | -31.7 | NA | NA | NA | |||||||||||||
| 4iqw | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | GLN | A:242 | A:371 | 154.0 | 0.856 | H | -62.4 | -41.1 | 154.0 | 0.856 | 0.0 |
HOH |
7.263 |
O |
O |
||
| 4iqv | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | GLN | A:242 | A:371 | 161.0 | 0.894 | H | -62.6 | -39.3 | 161.0 | 0.894 | 0.0 |
HOH |
4.563 |
O |
O |
||
| 4qzc | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 91.0 | NA | H | -63.5 | -37.4 | 91.0 | NA | NA |
HOH |
4.114 |
CA |
O |
||
| 4qzd | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 91.0 | NA | H | -63.7 | -37.5 | 91.0 | NA | NA |
HOH |
3.576 |
CA |
O |
||
| 4qze | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 175.0 | 0.972 | H | -65.9 | -32.1 | 175.0 | 0.972 | 0.0 |
HOH |
3.343 |
CB |
O |
||
| 4qzf | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 163.0 | 0.906 | H | -61.8 | -40.0 | 163.0 | 0.906 | 0.0 | ||||||
| 4qzg | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 92.0 | NA | H | -65.5 | -37.2 | 92.0 | NA | NA |
HOH |
3.341 |
C |
O |
||
| 4qzh | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 92.0 | NA | H | -63.3 | -36.9 | 92.0 | NA | NA | ||||||
| 4qzi | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | GLN | A:261 | A:371 | 91.0 | NA | H | -67.5 | -31.9 | 91.0 | NA | NA |
HOH |
3.321 |
CB |
O |
||
| 1kdh | 2 | 12802443 | 82.92 | 0.0 |
X-RAY |
2002-05-13 | GLN | B:224 | A:371 | 154.0 | 0.856 | T | -58.8 | -12.2 | 154.0 | 0.856 | 0.0 | ||||||
| 1kej | 1 | P09838 | 82.92 | 0.0 |
X-RAY |
2002-05-16 | GLN | A:224 | A:371 | 139.0 | 0.772 | T | -59.5 | -15.2 | 139.0 | 0.772 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04053-f1 | 1 | P04053 | 100.0 | 0.0 | LYS | A:370 | A:370 | 183.0 | 0.915 | H | -59.9 | -34.1 | |