Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 98092109 . G A CCDS7447.1:NM_004088.3:c.1115gGa>gAa_NP_004079.3:p.372G>E Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jms 1 P09838 81.27 0.0 X-RAY
 2002-01-23 GLY A:244 A:373 43.0 0.573 T 72.2 27.8 43.0 0.573 0.0
4iqt 1 P09838 81.27 0.0 X-RAY
 2013-09-04 GLY A:244 A:373 44.0 0.587 T 73.7 26.1 44.0 0.587 0.0 HOH
 3.106
 C
 O
4iqu 1 P09838 81.27 0.0 X-RAY
 2013-09-04 GLY A:244 A:373 45.0 0.6 T 77.4 31.2 45.0 0.6 0.0 HOH
 3.522
 CA
 O
4i27 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 45.0 0.6 T 73.2 29.7 45.0 0.6 0.0 HOH
 8.896
 C
 O
4i28 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 43.0 0.573 T 76.8 30.6 43.0 0.573 0.0 HOH
 3.295
 CA
 O
4i29 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 43.0 0.573 T 75.2 31.1 43.0 0.573 0.0 HOH
 3.293
 C
 O
4i2a 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 43.0 0.573 T 80.9 31.4 43.0 0.573 0.0 HOH
 3.408
 CA
 O
4i2b 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 43.0 0.573 T 76.6 31.1 43.0 0.573 0.0 HOH
 3.406
 CA
 O
4i2c 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 44.0 0.587 T 84.2 30.7 44.0 0.587 0.0 HOH
 4.189
 O
 O
4i2d 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 44.0 0.587 T 87.9 27.7 44.0 0.587 0.0 HOH
 7.320
 O
 O
4i2e 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 44.0 0.587 T 75.8 31.5 44.0 0.587 0.0 HOH
 3.400
 CA
 O
4i2f 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 45.0 0.6 T 76.2 29.9 45.0 0.6 0.0 HOH
 3.266
 C
 O
4i2g 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 46.0 0.613 T 73.7 28.9 46.0 0.613 0.0 HOH
 4.116
 O
 O
4i2h 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 44.0 0.587 T 77.8 33.0 44.0 0.587 0.0 HOH
 3.792
 O
 O
4i2i 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 47.0 0.627 T 75.8 30.5 47.0 0.627 0.0 HOH
 3.993
 N
 O
4i2j 1 P09838 81.27 0.0 X-RAY
 2013-07-24 GLY A:263 A:373 43.0 0.573 T 73.1 33.2 43.0 0.573 0.0 HOH
 5.916
 CA
 O
4qz8 1 P09838 81.27 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 41.0 0.547 T 71.0 34.7 41.0 0.547 0.0
4qz9 1 P09838 81.27 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 45.0 0.6 T 69.2 31.6 45.0 0.6 0.0 HOH
 3.094
 O
 O
4qza 1 P09838 81.27 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 45.0 0.6 T 66.5 35.6 45.0 0.6 0.0 HOH
 3.264
 O
 O
4qzb 1 P09838 81.27 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 45.0 0.6 T 66.2 33.2 45.0 0.6 0.0 HOH
 3.074
 O
 O
5d46 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 GLY A:263 A:373 53.0 0.707 T 73.7 22.8 53.0 0.707 0.0 HOH
 5.479
 O
 O
5d49 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 GLY A:263 A:373 46.0 0.613 T 68.9 20.6 46.0 0.613 0.0 HOH
 2.731
 O
 O
5d4b 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 GLY A:263 A:373 50.0 0.667 T 67.2 31.1 50.0 0.667 0.0 HOH
 7.372
 N
 O
GLY B:263 B:373 55.0 0.733 T 67.1 31.2 NA NA NA
4iqw 1 P09838 81.0 0.0 X-RAY
 2013-09-04 GLY A:244 A:373 44.0 0.587 T 73.0 30.0 44.0 0.587 0.0 HOH
 3.926
 O
 O
4iqv 1 P09838 81.0 0.0 X-RAY
 2013-09-04 GLY A:244 A:373 43.0 0.573 T 68.2 29.5 43.0 0.573 0.0 HOH
 4.196
 CA
 O
4qzc 1 P09838 81.0 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 53.0 0.707 T 80.1 33.1 53.0 0.707 0.0 HOH
 4.774
 O
 O
4qzd 1 P09838 81.0 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 53.0 0.707 T 81.2 32.4 53.0 0.707 0.0 HOH
 6.349
 N
 O
4qze 1 P09838 81.0 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 43.0 0.573 T 76.2 32.1 43.0 0.573 0.0 HOH
 3.434
 CA
 O
4qzf 1 P09838 81.0 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 55.0 0.733 T 69.2 33.8 55.0 0.733 0.0
4qzg 1 P09838 81.0 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 42.0 0.56 T 75.0 32.7 42.0 0.56 0.0 HOH
 5.520
 N
 O
4qzh 1 P09838 81.0 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 52.0 0.693 T 81.6 30.9 52.0 0.693 0.0 HOH
 7.097
 O
 O
4qzi 1 P09838 81.0 0.0 X-RAY
 2015-06-10 GLY A:263 A:373 44.0 0.587 T 70.9 33.6 44.0 0.587 0.0 HOH
 6.098
 N
 O
1kdh 2 12802443 82.92 0.0 X-RAY
 2002-05-13 GLY B:226 A:373 40.0 0.533 T 60.0 49.6 40.0 0.533 0.0
1kej 1 P09838 82.92 0.0 X-RAY
 2002-05-16 GLY A:226 A:373 39.0 0.52 T 123.4 -17.7 39.0 0.52 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04053-f1 1 P04053 100.0 0.0 GLY A:372 A:372 41.0 0.547 T 66.3 26.0