Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 98092319 | . | G | A | CCDS7447.1:NM_004088.3:c.1325cGt>cAt_NP_004079.3:p.442R>H | Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1jms | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2002-01-23 | ARG | A:314 | A:443 | 41.0 | 0.182 | H | -56.7 | -41.5 | 41.0 | 0.182 | 0.0 |
HOH |
3.420 |
CD |
O |
||
| 4iqt | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | ARG | A:314 | A:443 | 54.0 | 0.24 | H | -57.6 | -33.1 | 54.0 | 0.24 | 0.0 |
HOH |
3.263 |
N |
O |
||
| 4iqu | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-09-04 | ARG | A:314 | A:443 | 35.0 | 0.156 | H | -57.0 | -35.1 | 35.0 | 0.156 | 0.0 |
HOH |
3.044 |
NE |
O |
||
| 4i27 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 37.0 | 0.164 | H | -52.8 | -37.6 | 37.0 | 0.164 | 0.0 |
HOH |
3.110 |
NH1 |
O |
||
| 4i28 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 35.0 | 0.156 | H | -53.0 | -38.9 | 35.0 | 0.156 | 0.0 |
HOH |
3.268 |
N |
O |
||
| 4i29 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 36.0 | 0.16 | H | -55.8 | -36.4 | 36.0 | 0.16 | 0.0 |
HOH |
3.231 |
N |
O |
||
| 4i2a | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 36.0 | 0.16 | H | -55.9 | -34.0 | 36.0 | 0.16 | 0.0 |
HOH |
2.930 |
NE |
O |
||
| 4i2b | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 34.0 | 0.151 | H | -55.1 | -36.4 | 34.0 | 0.151 | 0.0 |
HOH |
3.302 |
N |
O |
||
| 4i2c | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 36.0 | 0.16 | H | -55.5 | -32.9 | 36.0 | 0.16 | 0.0 |
HOH |
2.913 |
NH2 |
O |
||
| 4i2d | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 35.0 | 0.156 | H | -56.9 | -35.1 | 35.0 | 0.156 | 0.0 |
HOH |
3.237 |
N |
O |
||
| 4i2e | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 36.0 | 0.16 | H | -57.7 | -34.2 | 36.0 | 0.16 | 0.0 |
HOH |
2.795 |
NH2 |
O |
||
| 4i2f | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 34.0 | 0.151 | H | -56.2 | -35.1 | 34.0 | 0.151 | 0.0 |
HOH |
2.822 |
NH2 |
O |
||
| 4i2g | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 34.0 | 0.151 | H | -57.0 | -34.9 | 34.0 | 0.151 | 0.0 |
HOH |
3.176 |
N |
O |
||
| 4i2h | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 58.0 | 0.258 | H | -56.4 | -34.8 | 58.0 | 0.258 | 0.0 |
HOH |
5.749 |
CB |
O |
||
| 4i2i | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 54.0 | 0.24 | H | -61.3 | -36.6 | 54.0 | 0.24 | 0.0 |
HOH |
3.148 |
N |
O |
||
| 4i2j | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2013-07-24 | ARG | A:333 | A:443 | 39.0 | 0.173 | H | -56.7 | -33.6 | 39.0 | 0.173 | 0.0 |
HOH |
6.372 |
O |
O |
||
| 4qz8 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 40.0 | 0.178 | H | -55.4 | -34.3 | 40.0 | 0.178 | 0.0 |
HOH |
3.102 |
N |
O |
||
| 4qz9 | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 37.0 | 0.164 | H | -54.1 | -36.1 | 37.0 | 0.164 | 0.0 |
HOH |
3.106 |
O |
O |
||
| 4qza | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 37.0 | 0.164 | H | -52.1 | -35.7 | 37.0 | 0.164 | 0.0 |
HOH |
3.206 |
O |
O |
||
| 4qzb | 1 | P09838 | 81.27 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 37.0 | 0.164 | H | -55.1 | -36.0 | 37.0 | 0.164 | 0.0 |
HOH |
3.128 |
O |
O |
||
| 5d46 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | ARG | A:333 | A:443 | 26.0 | NA | H | -40.6 | -49.8 | 26.0 | NA | NA |
HOH |
7.553 |
O |
O |
||
| 5d49 | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | ARG | A:333 | A:443 | 38.0 | 0.169 | H | -60.1 | -36.4 | 38.0 | 0.169 | 0.0 |
HOH |
2.803 |
NH2 |
O |
||
| 5d4b | 1 | Q3UZ80 | 81.27 | 0.0 |
X-RAY |
2016-07-27 | ARG | A:333 | A:443 | 66.0 | 0.293 | H | -53.8 | -47.7 | 66.0 | 0.293 | 0.0 |
HOH |
3.106 |
N |
O |
||
| ARG | B:333 | B:443 | 23.0 | NA | H | -46.3 | -55.9 | NA | NA | NA | |||||||||||||
| 4iqw | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | ARG | A:314 | A:443 | 35.0 | 0.156 | H | -57.2 | -35.9 | 35.0 | 0.156 | 0.0 |
HOH |
3.822 |
CG |
O |
||
| 4iqv | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2013-09-04 | ARG | A:314 | A:443 | 34.0 | 0.151 | H | -55.6 | -35.2 | 34.0 | 0.151 | 0.0 |
HOH |
3.163 |
N |
O |
||
| 4qzc | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 59.0 | 0.262 | H | -55.8 | -34.1 | 59.0 | 0.262 | 0.0 |
HOH |
6.103 |
CB |
O |
||
| 4qzd | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 59.0 | 0.262 | H | -55.8 | -35.9 | 59.0 | 0.262 | 0.0 |
HOH |
6.306 |
CB |
O |
||
| 4qze | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 44.0 | 0.196 | H | -56.8 | -32.2 | 44.0 | 0.196 | 0.0 |
HOH |
3.408 |
N |
O |
||
| 4qzf | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 59.0 | 0.262 | H | -54.9 | -34.0 | 59.0 | 0.262 | 0.0 |
HOH |
2.778 |
NH1 |
O |
||
| 4qzg | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 71.0 | 0.316 | H | -56.0 | -30.9 | 71.0 | 0.316 | 0.0 |
HOH |
8.409 |
O |
O |
||
| 4qzh | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 64.0 | 0.284 | H | -55.7 | -34.8 | 64.0 | 0.284 | 0.0 |
HOH |
2.875 |
NH2 |
O |
||
| 4qzi | 1 | P09838 | 81.0 | 0.0 |
X-RAY |
2015-06-10 | ARG | A:333 | A:443 | 64.0 | 0.284 | H | -56.0 | -34.8 | 64.0 | 0.284 | 0.0 |
HOH |
6.154 |
O |
O |
||
| 1kdh | 2 | 12802443 | 82.92 | 0.0 |
X-RAY |
2002-05-13 | ARG | B:296 | A:443 | 38.0 | 0.169 | H | -41.8 | -36.0 | 38.0 | 0.169 | 0.0 | ||||||
| 1kej | 1 | P09838 | 82.92 | 0.0 |
X-RAY |
2002-05-16 | ARG | A:296 | A:443 | 40.0 | 0.178 | H | -64.9 | -35.8 | 40.0 | 0.178 | 0.0 |
HOH |
9.713 |
N |
O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04053-f1 | 1 | P04053 | 100.0 | 0.0 | ARG | A:442 | A:442 | 46.0 | 0.204 | H | -52.7 | -37.9 | |