Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 98097935 . C A CCDS7447.1:NM_004088.3:c.1484gCg>gAg_NP_004079.3:p.495A>E Homo sapiens DNA nucleotidylexotransferase (DNTT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jms 1 P09838 81.27 0.0 X-RAY
 2002-01-23 ALA A:367 A:496 72.0 0.626 H -61.6 -45.0 72.0 0.626 0.0 HOH
 3.558
 CB
 O
4iqt 1 P09838 81.27 0.0 X-RAY
 2013-09-04 ALA A:367 A:496 73.0 0.635 H -63.1 -38.6 73.0 0.635 0.0 HOH
 3.551
 N
 O
4iqu 1 P09838 81.27 0.0 X-RAY
 2013-09-04 ALA A:367 A:496 75.0 0.652 H -60.6 -41.4 75.0 0.652 0.0 HOH
 3.598
 N
 O
4i27 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 74.0 0.643 H -61.1 -43.6 74.0 0.643 0.0 HOH
 2.730
 O
 O
4i28 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 70.0 0.609 H -60.9 -42.9 70.0 0.609 0.0 HOH
 2.655
 O
 O
4i29 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 71.0 0.617 H -61.4 -41.4 71.0 0.617 0.0 HOH
 3.632
 CA
 O
4i2a 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 70.0 0.609 H -63.8 -39.3 70.0 0.609 0.0 HOH
 3.559
 CB
 O
4i2b 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 74.0 0.643 H -61.4 -42.3 74.0 0.643 0.0 HOH
 2.686
 O
 O
4i2c 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 75.0 0.652 H -61.5 -40.7 75.0 0.652 0.0 HOH
 3.469
 O
 O
4i2d 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 75.0 0.652 H -58.8 -43.4 75.0 0.652 0.0 HOH
 3.371
 O
 O
4i2e 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 73.0 0.635 H -61.4 -42.6 73.0 0.635 0.0 HOH
 2.842
 O
 O
4i2f 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 73.0 0.635 H -61.8 -42.1 73.0 0.635 0.0 HOH
 2.677
 O
 O
4i2g 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 74.0 0.643 H -60.2 -42.2 74.0 0.643 0.0 HOH
 3.641
 CA
 O
4i2h 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 72.0 0.626 H -62.6 -41.8 72.0 0.626 0.0 HOH
 3.505
 N
 O
4i2i 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 70.0 0.609 H -62.7 -42.3 70.0 0.609 0.0 HOH
 3.752
 CA
 O
4i2j 1 P09838 81.27 0.0 X-RAY
 2013-07-24 ALA A:386 A:496 75.0 0.652 H -61.6 -41.8 75.0 0.652 0.0 HOH
 4.056
 O
 O
4qz8 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 72.0 0.626 H -62.6 -40.2 72.0 0.626 0.0 HOH
 3.663
 CA
 O
4qz9 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 72.0 0.626 H -64.7 -39.1 72.0 0.626 0.0 HOH
 3.440
 CB
 O
4qza 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 72.0 0.626 H -62.0 -39.7 72.0 0.626 0.0 HOH
 3.247
 O
 O
4qzb 1 P09838 81.27 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 71.0 0.617 H -61.6 -41.5 71.0 0.617 0.0 HOH
 2.725
 O
 O
5d46 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 ALA A:386 A:496 72.0 0.626 H -62.1 -36.4 72.0 0.626 0.0 HOH
 7.976
 O
 O
5d49 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 ALA A:386 A:496 72.0 0.626 H -62.0 -39.4 72.0 0.626 0.0 HOH
 2.719
 O
 O
5d4b 1 Q3UZ80 81.27 0.0 X-RAY
 2016-07-27 ALA A:386 A:496 71.0 0.617 H -59.3 -46.9 71.0 0.617 0.0 HOH
 6.973
 O
 O
ALA B:386 B:496 69.0 0.6 H -59.2 -46.5 NA NA NA
4iqw 1 P09838 81.0 0.0 X-RAY
 2013-09-04 ALA A:367 A:496 74.0 0.643 H -60.4 -40.9 74.0 0.643 0.0 HOH
 3.483
 CA
 O
4iqv 1 P09838 81.0 0.0 X-RAY
 2013-09-04 ALA A:367 A:496 72.0 0.626 H -62.4 -43.7 72.0 0.626 0.0 HOH
 3.931
 CB
 O
4qzc 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 74.0 0.643 H -59.7 -41.6 74.0 0.643 0.0 HOH
 3.796
 CB
 O
4qzd 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 73.0 0.635 H -62.9 -39.6 73.0 0.635 0.0 HOH
 3.427
 CA
 O
4qze 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 71.0 0.617 H -62.2 -42.6 71.0 0.617 0.0 HOH
 3.541
 CB
 O
4qzf 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 72.0 0.626 H -63.0 -39.1 72.0 0.626 0.0 HOH
 3.496
 N
 O
4qzg 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 73.0 0.635 H -62.4 -39.8 73.0 0.635 0.0 HOH
 3.487
 CA
 O
4qzh 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 74.0 0.643 H -60.5 -40.7 74.0 0.643 0.0 HOH
 4.608
 O
 O
4qzi 1 P09838 81.0 0.0 X-RAY
 2015-06-10 ALA A:386 A:496 73.0 0.635 H -65.1 -40.4 73.0 0.635 0.0 HOH
 9.169
 N
 O
1kdh 2 12802443 82.92 0.0 X-RAY
 2002-05-13 ALA B:349 A:496 65.0 0.565 H -57.5 -46.4 65.0 0.565 0.0
1kej 1 P09838 82.92 0.0 X-RAY
 2002-05-16 ALA A:349 A:496 71.0 0.617 H -55.7 -32.9 71.0 0.617 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04053-f1 1 P04053 100.0 0.0 ALA A:495 A:495 69.0 0.6 H -60.7 -44.4