Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 110327719 . A C CCDS8344.1:NM_004109.4:c.388Atc>Ctc_NP_004100.1:p.130I>L Homo sapiens ferredoxin 1 (FDX1), mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3p1m 1 P10109 100.0 1e-88 X-RAY
 2010-11-03 ILE A:71 A:130 61.0 0.349 -68.0 136.2 61.0 0.349 0.0 HOH
 2.765
 N
 O
ILE B:71 B:130 61.0 0.349 -74.3 127.2 NA NA NA
ILE C:71 C:130 61.0 0.349 -65.9 135.4 NA NA NA
ILE D:71 D:130 62.0 0.354 -73.6 126.9 NA NA NA
ILE E:71 E:130 62.0 0.354 -75.1 127.6 NA NA NA
ILE F:71 F:130 63.0 0.36 -74.4 128.3 NA NA NA
ILE G:71 G:130 62.0 0.354 -73.2 129.0 62.0 0.354 0.0 HOH
 3.736
 C
 O
ILE H:71 H:130 63.0 0.36 -72.9 128.8 NA NA NA
3n9z 2 P10109 100.0 6e-88 X-RAY
 2011-06-08 ILE C:69 NA:NA DO NA DO DO DO NA NA NA
ILE D:69 NA:NA DO NA DO DO DO NA NA NA
3na1 2 P10109 100.0 6e-88 X-RAY
 2011-06-08 ILE C:69 NA:NA DO NA DO DO DO NA NA NA
ILE D:69 NA:NA DO NA DO DO DO NA NA NA
7m8i 1 P10109,P19099 100.0 9e-86 X-RAY
 2021-05-26 ILE A:71 A:130 48.0 0.274 -79.5 129.7 48.0 0.274 0.0
ILE B:71 B:130 35.0 0.2 -76.6 132.7 35.0 0.2 0.0
ILE C:71 NA:NA DO NA DO DO DO NA NA NA
3n9y 2 P10109 100.0 4e-81 X-RAY
 2011-06-08 ILE C:69 C:70 43.0 0.246 -82.7 124.6 42.0 0.24 0.006 A:P05108:0.006
 HOH
 4.403
 C
 O
ILE D:69 D:70 48.0 0.274 -85.1 122.9 NA NA NA
1l6u 1 P00257 89.52 9e-81 NMR
 2002-06-26 ILE A:70 A:70 48.0 0.274 -140.0 158.5 48.0 0.274 0.0 FES
 8.797
 HD13
 FE2
1cje 1 P00257 89.43 3e-80 X-RAY
 2000-01-21 ILE A:69 A:70 58.0 0.331 -70.3 136.5 58.0 0.331 0.0 HOH
 3.634
 CA
 O
ILE B:69 B:70 80.0 0.457 -70.9 118.4 80.0 0.457 0.0 HOH
 4.467
 CG2
 O
ILE C:69 C:70 61.0 0.349 -82.1 137.1 NA NA NA
ILE D:69 D:70 82.0 0.469 -77.5 143.5 NA NA NA
1e6e 2 P00257 89.43 5e-80 X-RAY
 2001-08-09 ILE B:70 B:70 63.0 0.36 -70.6 135.3 63.0 0.36 0.0 HOH
 3.782
 CA
 O
ILE D:70 D:70 61.0 0.349 -86.7 128.2 NA NA NA
1ayf 1 P00257 94.29 1e-71 X-RAY
 1998-12-30 ILE A:67 A:70 66.0 0.377 -73.4 138.1 66.0 0.377 0.0 HOH
 2.887
 N
 O
ILE B:67 B:70 64.0 0.366 -74.1 132.2 64.0 0.366 0.0 HOH
 3.739
 CA
 O
2bt6 1 P00257 93.46 2e-71 X-RAY
 2006-01-25 ILE A:70 A:70 64.0 0.366 -71.1 140.6 64.0 0.366 0.0 HOH
 2.929
 N
 O
ILE B:70 B:70 66.0 0.377 -71.1 138.1 NA NA NA
3na0 2 P10109 100.0 6e-45 X-RAY
 2010-09-08 ILE C:43 NA:NA DO NA DO DO DO NA NA NA
ILE D:43 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p10109-f1 1 P10109 100.0 6e-134 ILE A:130 A:130 48.0 0.274 -64.5 139.4