Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 110333122 . A C CCDS8344.1:NM_004109.4:c.485aAt>aCt_NP_004100.1:p.162N>T Homo sapiens ferredoxin 1 (FDX1), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3p1m 1 P10109 100.0 1e-88 X-RAY
 2010-11-03 ASN A:103 A:162 98.0 0.613 T 72.2 15.7 98.0 0.613 0.0 HOH
 2.597
 OD1
 O
ASN B:103 B:162 91.0 0.569 T 65.2 19.2 NA NA NA
ASN C:103 C:162 97.0 0.606 T 71.9 15.0 NA NA NA
ASN D:103 D:162 89.0 0.556 T 65.9 18.5 NA NA NA
ASN E:103 E:162 90.0 0.562 T 66.6 18.1 NA NA NA
ASN F:103 F:162 92.0 0.575 T 64.6 20.5 NA NA NA
ASN G:103 G:162 91.0 0.569 T 65.7 20.3 91.0 0.569 0.0 HOH
 2.436
 O
 O
ASN H:103 H:162 89.0 0.556 T 65.6 18.3 NA NA NA
3n9z 2 P10109 100.0 6e-88 X-RAY
 2011-06-08 ASN C:101 NA:NA DO NA DO DO DO NA NA NA
ASN D:101 NA:NA DO NA DO DO DO NA NA NA
3na1 2 P10109 100.0 6e-88 X-RAY
 2011-06-08 ASN C:101 NA:NA DO NA DO DO DO NA NA NA
ASN D:101 NA:NA DO NA DO DO DO NA NA NA
7m8i 1 P10109,P19099 100.0 9e-86 X-RAY
 2021-05-26 ASN A:103 A:162 86.0 0.537 T 61.3 30.3 86.0 0.537 0.0
ASN B:103 B:162 87.0 0.544 T 59.8 27.8 87.0 0.544 0.0
ASN C:103 NA:NA DO NA DO DO DO NA NA NA
3n9y 2 P10109 100.0 4e-81 X-RAY
 2011-06-08 ASN C:101 NA:NA DO NA DO DO DO NA NA NA
ASN D:101 NA:NA DO NA DO DO DO NA NA NA
1l6u 1 P00257 89.52 9e-81 NMR
 2002-06-26 ASN A:102 A:102 82.0 0.512 T 81.5 37.8 82.0 0.512 0.0
1cje 1 P00257 89.43 3e-80 X-RAY
 2000-01-21 ASN A:101 A:102 92.0 0.575 T 73.8 22.0 92.0 0.575 0.0 HOH
 2.689
 O
 O
ASN B:101 B:102 96.0 0.6 T 60.2 33.0 96.0 0.6 0.0 HOH
 2.694
 ND2
 O
ASN C:101 C:102 89.0 0.556 T 68.5 19.5 NA NA NA
ASN D:101 D:102 90.0 0.562 T 75.1 17.6 NA NA NA
1e6e 2 P00257 89.43 5e-80 X-RAY
 2001-08-09 ASN B:102 B:102 99.0 0.619 T 74.5 3.6 99.0 0.619 0.0
ASN D:102 D:102 93.0 0.581 T 65.5 11.6 NA NA NA
1ayf 1 P00257 94.29 1e-71 X-RAY
 1998-12-30 ASN A:99 A:102 99.0 0.619 T 69.7 7.7 99.0 0.619 0.0 HOH
 2.579
 OD1
 O
ASN B:99 B:102 95.0 0.594 T 65.5 14.2 95.0 0.594 0.0 HOH
 2.603
 OD1
 O
2bt6 1 P00257 93.46 2e-71 X-RAY
 2006-01-25 ASN A:102 A:102 93.0 0.581 T 73.8 14.0 93.0 0.581 0.0 HOH
 2.692
 O
 O
ASN B:102 B:102 97.0 0.606 T 67.2 15.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p10109-f1 1 P10109 100.0 6e-134 ASN A:162 A:162 94.0 0.588 T 60.4 24.6