wupsivus

Variant

Genome	Chromosome	Position	VCF ID	Ref	Alt	mRNA Change	mRNA Info
GRCh37	chr11	116706786	.	T	A	CCDS8378.1:NM_000039.1:c.542gAc>gTc_NP_000030.1:p.181D>V	Homo sapiens apolipoprotein A-I (APOA1), mRNA.

pdb_id	:
label_asym_id	:
label_seq_id	:
label_comp_id	:
auth_asym_id	:
auth_seq_id	:

alphafold_id	:
label_asym_id	:
label_seq_id	:
label_comp_id	:
auth_asym_id	:
auth_seq_id	:

PDB

Entity							Residue			Monomer					BioUnit				Ligand				View
PDB	Entity	Uniprot	Identity	Evalue	ExpMethod	Date	Name	Label	Auth	ASA	rASA	SS	φ	ψ	ASA	rASA	ΔASA	Interaction	Name	Distance	Atom(p)	Atom(l)	View
3k2s	1	P02647	100.0	4e-177	SOLUTION SCATTERING	2010-04-07	ASP	A:157	A:157	119.0	0.793		64.9	176.3	111.0	0.74	0.053	B:P02647:0.053	POV POV POV POV POV	7.186 9.544 5.713 3.566 3.356	N CB OD2 OD2 OD2	C39 C34 C37 C37 C37
3k2s	1	P02647	100.0	4e-177	SOLUTION SCATTERING	2010-04-07	ASP	B:157	B:157	79.0	0.527	T	-126.0	142.1	55.0	0.367	0.16	A:P02647:0.16	POV POV POV POV POV POV	8.729 3.699 8.044 6.071 3.222 4.427	OD2 CB OD1 OD1 OD2 N	C316 C37 C218 C27 C29 C29
1av1	1	P02647	100.0	3e-142	X-RAY	1998-02-04	ASP	A:115	A:157	65.0	0.433	H	-53.0	-35.3	65.0	0.433	0.0
							ASP	B:115	B:157	68.0	0.453	H	-44.2	-27.5	58.0	0.387	0.066	C:P02647:0.067
							ASP	C:115	C:157	66.0	0.44	H	-53.1	-35.3	66.0	0.44	0.0
							ASP	D:115	D:157	69.0	0.46	H	-44.2	-27.5	58.0	0.387	0.073	A:P02647:0.073
4v6m	5	P02647	100.0	3e-142	EM	2014-07-09	ASP	E:114	A0:157	124.0	0.827	I	47.9	41.1	124.0	0.827	0.0		PEV PEV PEV PEV	8.003 6.556 9.289 7.112	N N OD2 N	C48 O11 C33 C43
4v6m	5	P02647	100.0	3e-142	EM	2014-07-09	ASP	F:114	A1:157	117.0	0.78	G	39.9	28.7	117.0	0.78	0.0		PGV PEV PEV	6.460 7.724 3.255	OD2 OD2 OD2	O06 C5 C44
6pts	1	P02647	100.0	2e-140	NMR	2020-05-13	ASP	A:114	A:314	76.0	0.507	H	-59.3	-51.1	76.0	0.507	0.0		PCW PCW	8.225 9.665	N N	C44 C28
6pts	1	P02647	100.0	2e-140	NMR	2020-05-13	ASP	B:114	C:512	90.0	0.6	H	-65.3	-35.0	90.0	0.6	0.0
6ptw	1	P02647	100.0	2e-140	NMR	2020-05-13	ASP	A:114	A:314	77.0	0.513	H	-58.9	-48.0	77.0	0.513	0.0		PCW	8.999	N	C28
6ptw	1	P02647	100.0	2e-140	NMR	2020-05-13	ASP	B:114	C:512	89.0	0.593	H	-59.4	-36.5	89.0	0.593	0.0
2msc	1	P02647	100.0	4e-140	NMR	2015-06-03	ASP	A:116	A:314	70.0	0.467	H	-61.1	-39.5	70.0	0.467	0.0		PCW	7.570	N	C28
2msc	1	P02647	100.0	4e-140	NMR	2015-06-03	ASP	B:116	C:512	79.0	0.527	H	-65.3	-37.4	79.0	0.527	0.0
2msd	1	P02647	100.0	4e-140	NMR	2015-06-03	ASP	A:116	A:314	84.0	0.56	H	-62.8	-46.0	84.0	0.56	0.0		PCW	9.840	N	C28
2msd	1	P02647	100.0	4e-140	NMR	2015-06-03	ASP	B:116	C:512	85.0	0.567	H	-61.9	-36.5	84.0	0.56	0.007	A:P02647:0.007
2mse	1	P02647	100.0	4e-140	NMR	2015-06-03	ASP	A:116	A:314	82.0	0.547	H	-63.1	-39.1	82.0	0.547	0.0
2mse	1	P02647	100.0	4e-140	NMR	2015-06-03	ASP	B:116	C:512	69.0	0.46	I	-64.9	-33.6	69.0	0.46	0.0
6cc9	1	P02647	100.0	4e-140	NMR	2018-09-05	ASP	A:116	A:314	75.0	0.5	H	-58.6	-53.9	75.0	0.5	0.0
6cc9	1	P02647	100.0	4e-140	NMR	2018-09-05	ASP	C:116	C:512	75.0	0.5	H	-66.8	-34.1	75.0	0.5	0.0
6cch	1	P02647	100.0	4e-140	NMR	2018-08-29	ASP	A:116	A:314	82.0	0.547	H	-63.1	-39.2	82.0	0.547	0.0		PCW	9.385	N	C17
6cch	1	P02647	100.0	4e-140	NMR	2018-08-29	ASP	C:116	C:512	70.0	0.467	I	-64.9	-33.6	70.0	0.467	0.0
6ccx	1	P02647	100.0	4e-140	NMR	2018-09-05	ASP	A:116	A:314	82.0	0.547	H	-62.6	-46.3	82.0	0.547	0.0
6ccx	1	P02647	100.0	4e-140	NMR	2018-09-05	ASP	C:116	C:512	82.0	0.547	H	-62.6	-39.5	82.0	0.547	0.0
6w4e	1	P02647	100.0	4e-140	NMR	2020-04-15	ASP	A:116	A:314	80.0	0.533	H	-59.6	-45.9	80.0	0.533	0.0		PCW	9.037	N	C43
6w4e	1	P02647	100.0	4e-140	NMR	2020-04-15	ASP	B:116	D:512	87.0	0.58	H	-60.9	-41.5	84.0	0.56	0.02	A:P02647:0.02
6w4f	1	P02647	100.0	4e-140	NMR	2020-04-29	ASP	A:116	A:314	71.0	0.473	H	-59.2	-44.3	71.0	0.473	0.0		PCW PCW	8.385 9.979	N N	C43 C28
6w4f	1	P02647	100.0	4e-140	NMR	2020-04-29	ASP	B:116	D:512	85.0	0.567	H	-62.6	-33.9	85.0	0.567	0.0
7rsc	2	P02647	100.0	4e-140	NMR	2021-09-22	ASP	C:116	D:357	79.0	0.527	H	-63.4	-46.5	79.0	0.527	0.0		7Q9 7Q9 7Q9 7Q9	8.963 9.594 4.650 8.394	OD1 H CB O	C1 C316 C23 O22
7rsc	2	P02647	100.0	4e-140	NMR	2021-09-22	ASP	D:116	E:657	77.0	0.513	H	-62.7	-41.8	77.0	0.513	0.0		7Q9 17F 17F	8.115 8.333 7.429	H N CA	C23 C36 C20
7rse	2	P02647	100.0	4e-140	NMR	2021-09-22	ASP	C:116	D:357	78.0	0.52	H	-64.7	-44.1	78.0	0.52	0.0		7Q9 7Q9 7Q9	8.532 7.350 8.502	OD1 OD1 OD1	C32 C13 C23
7rse	2	P02647	100.0	4e-140	NMR	2021-09-22	ASP	D:116	E:657	104.0	0.693	H	-55.6	-47.8	104.0	0.693	0.0		7Q9 17F 17F	8.873 6.693 8.101	H N N	C22 C36 C34
7kjr	2	P02647	100.0	8e-133	EM	2020-11-18	ASP	C:124	NA:NA	DO	NA	DO	DO	DO	NA	NA	NA
7kjr	2	P02647	100.0	8e-133	EM	2020-11-18	ASP	D:124	NA:NA	DO	NA	DO	DO	DO	NA	NA	NA
3r2p	1	P02647	100.0	4e-132	X-RAY	2011-09-21	ASP	A:158	A:157	62.0	0.413	H	-61.8	-31.9	61.0	0.407	0.006	A:P02647:0.007	HOH	4.091	OD1	O
6clz	2	P02647	89.57	2e-127	NMR	2018-12-12	ASP	B:125	B:179	79.0	0.527	H	-55.2	-51.6	79.0	0.527	0.0		PX4 PX4 PX4 PX4 PX4	5.575 4.621 8.211 9.146 5.312	N H HB2 O N	H30 H46 H4 H70 H44
6clz	2	P02647	89.57	2e-127	NMR	2018-12-12	ASP	C:125	C:179	69.0	0.46	H	-66.4	-51.0	69.0	0.46	0.0		PX4 PX4 PX4 PX4 PX4 PX4	9.343 8.021 4.760 5.397 9.878 7.114	N H OD2 N H OD2	H70 H41 H17 H42 H63 H8
6cm1	2	P02647	89.57	2e-127	NMR	2018-12-12	ASP	B:125	B:179	45.0	0.3	H	-58.2	-40.3	45.0	0.3	0.0		PX4 PX4 PX4 PX4	9.817 5.502 4.840 9.643	H HA OD2 N	H48 H27 H11 H36
6cm1	2	P02647	89.57	2e-127	NMR	2018-12-12	ASP	C:125	C:179	108.0	0.72	H	-56.7	-42.3	108.0	0.72	0.0		PX4 PX4 PX4 PX4	6.312 7.043 8.643 9.412	H H H HA	H70 O2 H6 O2
2n5e	1	P02647	88.36	1e-112	NMR	2016-12-21	ASP	A:81	A:157	79.0	0.527	H	-52.9	-52.3	76.0	0.507	0.02	B:P02647:0.02
2n5e	1	P02647	88.36	1e-112	NMR	2016-12-21	ASP	B:81	B:157	84.0	0.56	H	-53.1	-51.9	76.0	0.507	0.053	A:P02647:0.053

AlphaFold DB

Entity					Residue			Monomer					View
ID	Entity	Uniprot	Identity	Evalue	Name	Label	Auth	ASA	rASA	SS	φ	ψ	View
af-p02647-f1	1	P02647	100.0	0.0	ASP	A:181	A:181	99.0	0.66	H	-65.4	-46.5

wupsivus
	HOME ABOUT EXAMPLE HELP