wupsivus

Variant

Genome	Chromosome	Position	VCF ID	Ref	Alt	mRNA Change	mRNA Info
GRCh37	chr11	116707034	.	G	A	CCDS8378.1:NM_000039.1:c.294aaC>aaT_NP_000030.1:p.98N>N	Homo sapiens apolipoprotein A-I (APOA1), mRNA.

pdb_id	:
label_asym_id	:
label_seq_id	:
label_comp_id	:
auth_asym_id	:
auth_seq_id	:

alphafold_id	:
label_asym_id	:
label_seq_id	:
label_comp_id	:
auth_asym_id	:
auth_seq_id	:

PDB

Entity							Residue			Monomer					BioUnit				Ligand				View
PDB	Entity	Uniprot	Identity	Evalue	ExpMethod	Date	Name	Label	Auth	ASA	rASA	SS	φ	ψ	ASA	rASA	ΔASA	Interaction	Name	Distance	Atom(p)	Atom(l)	View
3k2s	1	P02647	100.0	4e-177	SOLUTION SCATTERING	2010-04-07	ASN	A:74	A:74	61.0	0.381	H	-61.5	-31.7	4.0	0.025	0.356	B:P02647:0.356	POV POV	5.511 5.972	N N	C13 C25
3k2s	1	P02647	100.0	4e-177	SOLUTION SCATTERING	2010-04-07	ASN	B:74	B:74	127.0	0.794	T	-69.8	13.0	85.0	0.531	0.263	A:P02647:0.263	POV POV POV	9.113 5.727 6.046	ND2 N ND2	C29 C14 C313
1av1	1	P02647	100.0	3e-142	X-RAY	1998-02-04	ASN	A:32	A:74	92.0	0.575	H	-77.3	-36.8	40.0	0.25	0.325	B:P02647:0.325
							ASN	B:32	B:74	83.0	0.519	H	-69.5	-24.6	31.0	0.194	0.325	A:P02647:0.325
							ASN	C:32	C:74	92.0	0.575	H	-77.2	-36.9	40.0	0.25	0.325	D:P02647:0.325
							ASN	D:32	D:74	83.0	0.519	H	-69.5	-24.6	32.0	0.2	0.319	C:P02647:0.319
4v6m	5	P02647	100.0	3e-142	EM	2014-07-09	ASN	E:31	A0:74	75.0	0.469	H	-55.8	-43.9	57.0	0.356	0.113	F:P02647:0.113	PEV PEV PEV PEV	6.674 6.991 8.768 8.674	N O O N	C25 C26 C48 C48
4v6m	5	P02647	100.0	3e-142	EM	2014-07-09	ASN	F:31	A1:74	96.0	0.6	T	-102.7	-62.8	55.0	0.344	0.256	E:P02647:0.256	PGV PGV PGV PGV PEV	8.976 9.898 3.999 9.777 6.123	ND2 ND2 ND2 N N	C18 C18 C11 C21 C48
6pts	1	P02647	100.0	2e-140	NMR	2020-05-13	ASN	A:31	A:231	81.0	0.506	H	-68.5	-39.5	0.0	0.0	0.506	B:P02647:0.506
6pts	1	P02647	100.0	2e-140	NMR	2020-05-13	ASN	B:31	C:429	52.0	0.325	H	-62.4	-44.6	4.0	0.025	0.3	A:P02647:0.3	PCW	8.209	HD22	C28
6ptw	1	P02647	100.0	2e-140	NMR	2020-05-13	ASN	A:31	A:231	80.0	0.5	H	-70.1	-35.6	0.0	0.0	0.5	B:P02647:0.5	PCW	9.209	C	C48
6ptw	1	P02647	100.0	2e-140	NMR	2020-05-13	ASN	B:31	C:429	56.0	0.35	H	-63.4	-45.7	0.0	0.0	0.35	A:P02647:0.35	PCW	8.621	HD22	C28
2msc	1	P02647	100.0	4e-140	NMR	2015-06-03	ASN	A:33	A:231	78.0	0.487	H	-64.7	-39.6	0.0	0.0	0.487	B:P02647:0.487	PCW	7.100	O	C48
2msc	1	P02647	100.0	4e-140	NMR	2015-06-03	ASN	B:33	C:429	68.0	0.425	H	-62.3	-41.2	1.0	0.006	0.419	A:P02647:0.419
2msd	1	P02647	100.0	4e-140	NMR	2015-06-03	ASN	A:33	A:231	80.0	0.5	H	-68.7	-36.3	0.0	0.0	0.5	B:P02647:0.5	PCW	9.463	C	C48
2msd	1	P02647	100.0	4e-140	NMR	2015-06-03	ASN	B:33	C:429	62.0	0.388	H	-68.9	-46.2	2.0	0.013	0.375	A:P02647:0.375	PCW	7.583	ND2	C28
2mse	1	P02647	100.0	4e-140	NMR	2015-06-03	ASN	A:33	A:231	81.0	0.506	H	-66.9	-38.0	1.0	0.006	0.5	B:P02647:0.5
2mse	1	P02647	100.0	4e-140	NMR	2015-06-03	ASN	B:33	C:429	65.0	0.406	H	-68.2	-39.9	7.0	0.044	0.362	A:P02647:0.362	PCW PCW	8.623 9.930	ND2 ND2	C26 C28
6cc9	1	P02647	100.0	4e-140	NMR	2018-09-05	ASN	A:33	A:231	96.0	0.6	H	-64.3	-46.8	42.0	0.263	0.337	C:P02647:0.338	PCW PCW	9.809 9.464	OD1 OD1	C46 C48
6cc9	1	P02647	100.0	4e-140	NMR	2018-09-05	ASN	C:33	C:429	85.0	0.531	H	-68.9	-39.3	0.0	0.0	0.531	A:P02647:0.531	PCW	8.923	OD1	C28
6cch	1	P02647	100.0	4e-140	NMR	2018-08-29	ASN	A:33	A:231	83.0	0.519	H	-66.9	-38.0	1.0	0.006	0.513	C:P02647:0.512
6cch	1	P02647	100.0	4e-140	NMR	2018-08-29	ASN	C:33	C:429	65.0	0.406	H	-68.2	-39.9	8.0	0.05	0.356	A:P02647:0.356
6ccx	1	P02647	100.0	4e-140	NMR	2018-09-05	ASN	A:33	A:231	77.0	0.481	H	-72.5	-32.1	0.0	0.0	0.481	C:P02647:0.481
6ccx	1	P02647	100.0	4e-140	NMR	2018-09-05	ASN	C:33	C:429	69.0	0.431	H	-62.4	-45.0	0.0	0.0	0.431	A:P02647:0.431	PCW	8.772	ND2	C28
6w4e	1	P02647	100.0	4e-140	NMR	2020-04-15	ASN	A:33	A:231	76.0	0.475	H	-73.3	-36.5	0.0	0.0	0.475	B:P02647:0.475
6w4e	1	P02647	100.0	4e-140	NMR	2020-04-15	ASN	B:33	D:429	68.0	0.425	H	-66.7	-42.8	14.0	0.087	0.338	A:P02647:0.338	PCW	8.852	HD22	C48
6w4f	1	P02647	100.0	4e-140	NMR	2020-04-29	ASN	A:33	A:231	81.0	0.506	H	-72.3	-34.7	0.0	0.0	0.506	B:P02647:0.506
6w4f	1	P02647	100.0	4e-140	NMR	2020-04-29	ASN	B:33	D:429	53.0	0.331	H	-67.3	-46.7	1.0	0.006	0.325	A:P02647:0.325	PCW	7.501	HD22	C28
7rsc	2	P02647	100.0	4e-140	NMR	2021-09-22	ASN	C:33	D:274	101.0	0.631	H	-62.3	-43.1	101.0	0.631	0.0		17F	5.741	H	C1Z
7rsc	2	P02647	100.0	4e-140	NMR	2021-09-22	ASN	D:33	E:574	79.0	0.494	H	-71.4	-36.5	79.0	0.494	0.0		7Q9 7Q9	9.746 9.398	H N	C311 C23
7rse	2	P02647	100.0	4e-140	NMR	2021-09-22	ASN	C:33	D:274	99.0	0.619	H	-63.4	-37.7	99.0	0.619	0.0		17F	5.689	H	C31
7rse	2	P02647	100.0	4e-140	NMR	2021-09-22	ASN	D:33	E:574	87.0	0.544	H	-63.2	-37.3	87.0	0.544	0.0
7kjr	2	P02647	100.0	8e-133	EM	2020-11-18	ASN	C:41	C:42	94.0	0.588	H	-65.9	-39.8	94.0	0.588	0.0		HOH	8.547	N	O
7kjr	2	P02647	100.0	8e-133	EM	2020-11-18	ASN	D:41	D:42	89.0	0.556	H	-65.9	-41.4	89.0	0.556	0.0		HOH	8.563	N	O
3r2p	1	P02647	100.0	4e-132	X-RAY	2011-09-21	ASN	A:75	A:74	101.0	0.631	H	-69.5	-36.3	65.0	0.406	0.225	A:P02647:0.225
6clz	2	P02647	89.57	2e-127	NMR	2018-12-12	ASN	B:20	B:74	95.0	0.594	H	-63.6	-39.2	89.0	0.556	0.038	C:P02647:0.037	PX4 PX4 PX4	7.230 5.819 9.859	HD22 H HB2	H72 H4 H45
6clz	2	P02647	89.57	2e-127	NMR	2018-12-12	ASN	C:20	C:74	88.0	0.55	H	-66.8	-40.5	88.0	0.55	0.0		PX4 PX4 PX4	8.582 9.746 8.686	C N H	H71 H8 H48
6cm1	2	P02647	89.57	2e-127	NMR	2018-12-12	ASN	B:20	B:74	81.0	0.506	H	-59.5	-35.4	74.0	0.463	0.043	C:P02647:0.044	PX4 PX4	6.518 7.280	C O	H46 H68
6cm1	2	P02647	89.57	2e-127	NMR	2018-12-12	ASN	C:20	C:74	92.0	0.575	H	-64.0	-33.5	83.0	0.519	0.056	B:P02647:0.056	PX4 PX4 PX4 PX4 PX4	4.400 7.527 8.327 8.598 9.535	O C O H C	H70 O6 H66 H50 O6
2n5e	1	P02647	88.36	1e-112	NMR	2016-12-21	ASN	A:20	A:74	82.0	0.512	H	-63.0	-44.0	82.0	0.512	0.0
2n5e	1	P02647	88.36	1e-112	NMR	2016-12-21	ASN	B:20	B:74	82.0	0.512	H	-63.0	-44.1	82.0	0.512	0.0

AlphaFold DB

Entity					Residue			Monomer					View
ID	Entity	Uniprot	Identity	Evalue	Name	Label	Auth	ASA	rASA	SS	φ	ψ	View
af-p02647-f1	1	P02647	100.0	0.0	ASN	A:98	A:98	108.0	0.675	H	-65.7	-41.7

wupsivus
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