Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 3735167 . T A CCDS7746.1:NM_016320.4:c.2458Ata>Tta_NP_057404.2:p.820I>L Homo sapiens nucleoporin 98 (NUP98), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ko6 1 P52948 100.0 1e-126 X-RAY
 2002-09-04 ILE A:144 A:820 18.0 0.103 -151.8 118.2 18.0 0.103 0.0
ILE C:144 C:820 12.0 0.069 -110.4 107.7 12.0 0.069 0.0
2q5x 1 P52948 99.35 2e-105 X-RAY
 2008-10-14 ILE A:105 A:820 9.0 0.051 -110.0 107.3 9.0 0.051 0.0 HOH
 3.684
 CA
 O
2q5y 1 P52948 100.0 8e-104 X-RAY
 2008-10-14 ILE A:109 A:820 11.0 0.063 -107.6 107.7 11.0 0.063 0.0 HOH
 3.727
 CA
 O
ILE C:109 C:820 16.0 0.091 -96.2 113.1 NA NA NA
3tkn 3 Q6PFD9 97.99 7e-100 X-RAY
 2012-04-11 ILE C:109 C:837 17.0 0.097 -88.0 114.2 15.0 0.086 0.011 A:P40368:0.011
ILE F:109 F:837 17.0 0.097 -88.5 113.9 NA NA NA
ILE I:109 I:837 17.0 0.097 -88.1 112.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p52948-f1 1 P52948 99.06 0.0 ILE A:837 A:837 9.0 0.051 -80.3 96.8