Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 3735175 . C A CCDS7746.1:NM_016320.4:c.2450cGt>cTt_NP_057404.2:p.817R>L Homo sapiens nucleoporin 98 (NUP98), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ko6 1 P52948 100.0 1e-126 X-RAY
 2002-09-04 ARG A:141 A:817 190.0 0.844 53.3 42.2 99.0 0.44 0.404 C:P52948:0.404
ARG C:141 C:817 198.0 0.88 55.1 46.7 198.0 0.88 0.0
2q5x 1 P52948 99.35 2e-105 X-RAY
 2008-10-14 ARG A:102 A:817 176.0 0.782 63.9 26.1 176.0 0.782 0.0 HOH
 2.908
 NH2
 O
2q5y 1 P52948 100.0 8e-104 X-RAY
 2008-10-14 ARG A:106 A:817 193.0 0.858 65.6 22.4 193.0 0.858 0.0 HOH
 4.159
 O
 O
ARG C:106 C:817 207.0 0.92 62.0 37.5 NA NA NA
3tkn 3 Q6PFD9 97.99 7e-100 X-RAY
 2012-04-11 ARG C:106 C:834 213.0 0.947 47.5 15.3 101.0 0.449 0.498 A:P40368:0.498
ARG F:106 F:834 214.0 0.951 51.1 16.2 NA NA NA
ARG I:106 I:834 215.0 0.956 48.7 15.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p52948-f1 1 P52948 99.06 0.0 ARG A:834 A:834 228.0 1.0 55.5 14.7