Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 3741986 . T A CCDS7746.1:NM_016320.4:c.2216gAa>gTa_NP_057404.2:p.739E>V Homo sapiens nucleoporin 98 (NUP98), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ko6 1 P52948 100.0 1e-126 X-RAY
 2002-09-04 GLU A:63 A:739 182.0 0.958 T -69.8 0.8 182.0 0.958 0.0
GLU C:63 NA:NA DO NA DO DO DO NA NA NA
2q5x 1 P52948 99.35 2e-105 X-RAY
 2008-10-14 GLU A:24 A:739 171.0 0.9 T -61.6 -16.8 171.0 0.9 0.0 HOH
 2.735
 OE2
 O
2q5y 1 P52948 100.0 8e-104 X-RAY
 2008-10-14 GLU A:28 A:739 206.0 1.0 T -58.4 -9.7 206.0 1.0 0.0
GLU C:28 C:739 206.0 1.0 T -55.9 -18.3 NA NA NA
3tkn 3 Q6PFD9 97.99 7e-100 X-RAY
 2012-04-11 GLU C:28 C:756 169.0 0.889 T -76.7 61.8 169.0 0.889 0.0
GLU F:28 F:756 170.0 0.895 T -77.3 62.0 NA NA NA
GLU I:28 I:756 171.0 0.9 T -77.3 62.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p52948-f1 1 P52948 99.06 0.0 GLU A:756 A:756 211.0 1.0 T -52.5 -18.2