Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 3741989 . T A CCDS7746.1:NM_016320.4:c.2213aAt>aTt_NP_057404.2:p.738N>I Homo sapiens nucleoporin 98 (NUP98), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ko6 1 P52948 100.0 1e-126 X-RAY
 2002-09-04 ASN A:62 A:738 61.0 0.381 -71.0 -178.7 61.0 0.381 0.0
ASN C:62 C:738 152.0 0.95 -139.3 360.0 152.0 0.95 0.0
2q5x 1 P52948 99.35 2e-105 X-RAY
 2008-10-14 ASN A:23 A:738 53.0 0.331 -94.0 -179.5 53.0 0.331 0.0 HOH
 3.039
 ND2
 O
2q5y 1 P52948 100.0 8e-104 X-RAY
 2008-10-14 ASN A:27 A:738 71.0 0.444 -77.6 162.5 71.0 0.444 0.0
ASN C:27 C:738 70.0 0.438 -82.3 171.2 NA NA NA
3tkn 3 Q6PFD9 97.99 7e-100 X-RAY
 2012-04-11 ASN C:27 C:755 75.0 0.469 -45.8 153.5 75.0 0.469 0.0
ASN F:27 F:755 76.0 0.475 -45.8 153.5 NA NA NA
ASN I:27 I:755 75.0 0.469 -46.0 153.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p52948-f1 1 P52948 99.06 0.0 ASN A:755 A:755 86.0 0.537 -70.1 163.6