Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 65771196 . C A CCDS8125.1:NM_001143985.1:c.223Cgg>Agg_NP_001137457.1:p.75R>R Homo sapiens barrier to autointegration factor 1 (BANF1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ci4 1 O75531 100.0 6e-62 X-RAY
 2000-08-16 ARG A:75 A:75 122.0 0.542 H -66.7 -42.0 122.0 0.542 0.0 HOH
 2.917
 O
 O
ARG B:75 B:75 82.0 0.364 H -59.9 -50.5 82.0 0.364 0.0 HOH
 2.993
 O
 O
2bzf 1 O75531 100.0 6e-62 X-RAY
 2005-09-15 ARG A:75 A:75 111.0 0.493 H -57.2 -49.2 111.0 0.493 0.0 DA
DG
DG
DC
DA
HOH
 5.387
3.366
6.934
9.900
8.873
4.733
 NH2
NH2
NH2
C
C
O
 O3'
OP1
OP2
O3'
OP1
O
6unt 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 68.0 NA H -59.3 -46.5 68.0 NA NA HOH
 2.735
 HG2
 O
ARG B:75 B:75 99.0 0.44 H -57.7 -45.7 99.0 0.44 0.0 HOH
 2.947
 HH12
 O
6ure 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 128.0 0.569 H -64.4 -44.0 128.0 0.569 0.0 HOH
 1.643
 HH12
 O
ARG B:75 B:75 94.0 0.418 H -58.2 -47.5 94.0 0.418 0.0 HOH
 2.853
 HG2
 O
6urj 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 154.0 0.684 H -64.5 -44.3 154.0 0.684 0.0 HOH
 2.272
 HE
 O
ARG B:75 B:75 87.0 0.387 H -59.4 -45.9 87.0 0.387 0.0 HOH
 2.250
 HH12
 O
6urk 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 128.0 0.569 H -62.8 -43.7 128.0 0.569 0.0 HOH
 1.558
 HH11
 O
ARG B:75 B:75 137.0 0.609 H -56.7 -51.2 137.0 0.609 0.0 HOH
 4.272
 O
 O
6url 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 125.0 0.556 H -65.2 -42.9 125.0 0.556 0.0 HOH
 3.391
 HH22
 O
ARG B:75 B:75 134.0 0.596 H -57.3 -49.6 134.0 0.596 0.0 HOH
 3.375
 HE
 O
6urn 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 123.0 0.547 H -64.4 -38.9 123.0 0.547 0.0 HOH
 1.783
 HH11
 O
ARG B:75 B:75 79.0 0.351 H -58.6 -46.6 79.0 0.351 0.0 HOH
 2.672
 HH12
 O
6urr 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 86.0 0.382 H -68.0 -40.7 86.0 0.382 0.0 HOH
 2.888
 HG3
 O
ARG B:75 B:75 118.0 0.524 H -60.6 -44.6 118.0 0.524 0.0 HOH
 1.758
 HE
 O
6urz 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 87.0 0.387 H -65.7 -43.5 87.0 0.387 0.0 HOH
 1.485
 HH12
 O
ARG B:75 B:75 109.0 0.484 H -56.8 -50.0 109.0 0.484 0.0 HOH
 2.682
 HH21
 O
6us0 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 155.0 0.689 H -64.5 -44.4 155.0 0.689 0.0 HOH
 2.030
 HH11
 O
ARG B:75 B:75 96.0 0.427 H -59.6 -46.3 96.0 0.427 0.0 HOH
 2.871
 NH2
 O
6us1 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 139.0 0.618 H -62.7 -45.0 139.0 0.618 0.0 HOH
 2.427
 HH11
 O
ARG B:75 B:75 95.0 0.422 H -60.3 -46.5 95.0 0.422 0.0 HOH
 2.960
 NH2
 O
6us7 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 156.0 0.693 H -64.1 -45.2 156.0 0.693 0.0 HOH
 2.822
 HD3
 O
ARG B:75 B:75 90.0 0.4 H -58.1 -48.1 90.0 0.4 0.0 HOH
 2.902
 HG2
 O
6usb 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 120.0 0.533 H -63.4 -41.6 120.0 0.533 0.0 HOH
 2.475
 HH12
 O
ARG B:75 B:75 95.0 0.422 H -60.0 -47.2 95.0 0.422 0.0 HOH
 2.950
 HH21
 O
6usd 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 51.0 NA H -63.5 -45.0 51.0 NA NA EOH
HOH
 8.495
3.617
 C
CG
 H21
O
ARG B:75 B:75 95.0 0.422 H -56.9 -49.7 95.0 0.422 0.0 HOH
 3.036
 HH12
 O
6usi 1 O75531 100.0 6e-62 X-RAY
 2020-10-07 ARG A:75 A:75 125.0 0.556 H -63.7 -43.7 125.0 0.556 0.0 HOH
 1.549
 HH12
 O
ARG B:75 B:75 120.0 0.533 H -56.9 -48.3 120.0 0.533 0.0 HOH
 3.956
 O
 O
6ghd 2 O75531 95.45 3e-58 X-RAY
 2018-08-08 ARG B:74 D:75 122.0 0.542 H -59.7 -45.6 122.0 0.542 0.0 SO4
HOH
 2.652
4.937
 NH2
O
 O3
O
ARG D:74 E:75 122.0 0.542 H -59.7 -46.7 122.0 0.542 0.0 SO4
SO4
HOH
 8.226
2.633
2.451
 NH1
NE
NH2
 O3
O2
O
ARG E:74 A:75 127.0 0.564 H -58.3 -47.0 NA NA NA
ARG F:74 C:75 124.0 0.551 H -57.2 -47.9 NA NA NA
7ndy 1 O75531 95.45 3e-58 X-RAY
 2021-04-07 ARG A:75 A:75 114.0 0.507 H -64.5 -46.0 114.0 0.507 0.0 HOH
 2.839
 NH2
 O
ARG B:75 B:75 121.0 0.538 H -65.2 -42.5 121.0 0.538 0.0 HOH
 2.800
 O
 O
6rpr 2 ? 95.4 2e-57 X-RAY
 2020-03-04 ARG B:73 D:75 124.0 0.551 H -62.5 -47.9 124.0 0.551 0.0 SO4
HOH
 2.817
4.940
 NH2
O
 O4
O
ARG C:73 E:75 115.0 0.511 H -65.2 -47.1 115.0 0.511 0.0 HOH
 5.352
 NH1
 O
7abm 1 O75531 95.35 8e-57 X-RAY
 2021-07-07 ARG A:73 A:75 103.0 0.458 H -75.3 -45.6 103.0 0.458 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75531-f1 1 O75531 100.0 2e-62 ARG A:75 A:75 146.0 0.649 H -68.5 -43.5