Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111614249 | . | C | A | CCDS8348.1:NM_181699.2:c.1405Gcc>Tcc_NP_859050.1:p.469A>S | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | ALA | A:456 | A:456 | 39.0 | 0.339 | H | -56.7 | -34.5 | 39.0 | 0.339 | 0.0 |
HOH |
2.813 |
O |
O |
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ALA | B:456 | B:456 | 42.0 | 0.365 | H | -69.9 | -37.4 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | ALA | A:457 | A:457 | 26.0 | 0.226 | H | -44.6 | -39.4 | 9.0 | 0.078 | 0.148 |
B:P67775:0.148 |
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2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | ALA | A:457 | A:457 | 23.0 | 0.2 | H | -51.1 | -38.2 | 7.0 | 0.061 | 0.139 |
B:P67775:0.139 |
HOH |
6.590 |
N |
O |
|
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | ALA | A:457 | A:457 | 25.0 | 0.217 | H | -31.9 | -48.6 | NA | NA | NA | ||||||
ALA | D:457 | D:457 | 22.0 | 0.191 | H | -29.2 | -50.4 | 5.0 | 0.043 | 0.148 |
F:P67775:0.148 |
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3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | ALA | A:457 | A:457 | 23.0 | 0.2 | H | -49.4 | -36.4 | 9.0 | 0.078 | 0.122 |
B:P67775:0.122 |
HOH |
7.619 |
N |
O |
|
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | ALA | A:457 | A:457 | 24.0 | 0.209 | H | -49.9 | -36.4 | 10.0 | 0.087 | 0.122 |
B:P67775:0.122 |
HOH |
7.771 |
N |
O |
|
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | ALA | A:457 | A:457 | 37.0 | 0.322 | H | -63.0 | -44.8 | 20.0 | 0.174 | 0.148 |
C:P67775:0.148 |
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7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | ALA | J:457 | P:457 | 25.0 | 0.217 | H | -63.1 | -43.5 | 5.0 | 0.043 | 0.174 |
K:P67775:0.174 |
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7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | ALA | A:457 | A:457 | 33.0 | 0.287 | H | -58.4 | -35.0 | 12.0 | 0.104 | 0.183 |
C:P67775:0.183 |
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7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | ALA | EA:457 | p:457 | 30.0 | 0.261 | H | -64.8 | -35.4 | 8.0 | 0.07 | 0.191 |
FA:P67775:0.191 |
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3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | ALA | A:456 | A:457 | 24.0 | 0.209 | H | -48.0 | -41.7 | 6.0 | 0.052 | 0.157 |
C:P67775:0.157 |
HOH |
2.503 |
O |
O |
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2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | ALA | A:457 | A:457 | 19.0 | 0.165 | H | -46.8 | -28.8 | 1.0 | 0.009 | 0.156 |
C:P67775:0.157 |
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ALA | D:457 | D:457 | 24.0 | 0.209 | H | -53.8 | -42.8 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | ALA | A:457 | A:457 | 41.0 | 0.357 | H | -59.9 | -16.1 | 41.0 | 0.357 | 0.0 | ||||||
ALA | B:457 | B:457 | 36.0 | 0.313 | H | -66.9 | -25.3 | NA | NA | NA | |||||||||||||
ALA | C:457 | C:457 | 44.0 | 0.383 | H | -63.3 | -27.9 | NA | NA | NA | |||||||||||||
ALA | D:457 | D:457 | 48.0 | 0.417 | H | -51.8 | -21.0 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | ALA | A:458 | A:457 | 34.0 | 0.296 | H | -53.6 | -32.1 | 34.0 | 0.296 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | ALA | A:455 | A:457 | 32.0 | 0.278 | H | -61.8 | -41.9 | 32.0 | 0.278 | 0.0 | ||||||
ALA | B:455 | B:457 | 34.0 | 0.296 | H | -58.5 | -36.1 | 34.0 | 0.296 | 0.0 | |||||||||||||
ALA | E:455 | E:457 | 41.0 | 0.357 | H | -57.3 | -37.3 | NA | NA | NA | |||||||||||||
ALA | F:455 | F:457 | 41.0 | 0.357 | H | -61.4 | -41.0 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | ALA | A:450 | A:457 | 23.0 | 0.2 | H | -41.4 | -43.6 | 6.0 | 0.052 | 0.148 |
C:P67775:0.148 |
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ALA | D:450 | D:457 | 23.0 | 0.2 | H | -47.2 | -36.0 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | ALA | A:450 | A:457 | 27.0 | 0.235 | H | -39.3 | -47.4 | 7.0 | 0.061 | 0.174 |
C:P67775:0.174 |
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ALA | D:450 | D:457 | 24.0 | 0.209 | H | -38.3 | -49.4 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | ALA | A:452 | A:457 | 24.0 | 0.209 | H | -54.1 | -35.0 | 7.0 | 0.061 | 0.148 |
C:P67775:0.148 |
HOH |
4.118 |
CB |
O |
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ALA | D:452 | D:457 | 22.0 | 0.191 | H | -52.8 | -31.8 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | ALA | A:452 | A:457 | 25.0 | 0.217 | H | -52.7 | -33.4 | 5.0 | 0.043 | 0.174 |
C:P67775:0.174 |
HOH |
8.073 |
N |
O |
|
ALA | D:452 | D:457 | 27.0 | 0.235 | H | -66.0 | -27.6 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | ALA | A:450 | A:457 | 33.0 | 0.287 | H | -64.0 | -41.2 | 12.0 | 0.104 | 0.183 |
C:P67775:0.183 |
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ALA | D:450 | D:457 | 27.0 | 0.235 | H | -54.1 | -51.6 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | ALA | A:453 | A:457 | 29.0 | 0.252 | H | -63.5 | -38.4 | 8.0 | 0.07 | 0.182 |
C:P67775:0.183 |
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ALA | D:453 | D:457 | 29.0 | 0.252 | H | -58.3 | -27.2 | NA | NA | NA | |||||||||||||
ALA | G:453 | G:457 | 28.0 | 0.243 | H | -58.7 | -30.6 | NA | NA | NA | |||||||||||||
ALA | J:453 | J:457 | 36.0 | 0.313 | H | -63.5 | -30.0 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | ALA | A:448 | A:457 | 44.0 | 0.383 | H | -42.3 | -44.0 | 44.0 | 0.383 | 0.0 | ||||||
ALA | B:448 | B:457 | 43.0 | 0.374 | H | -30.0 | -52.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | ALA | A:469 | A:469 | 31.0 | 0.27 | H | -58.5 | -31.4 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | ALA | A:457 | A:457 | 30.0 | 0.261 | H | -58.1 | -32.3 |