Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111622902 | . | G | A | CCDS8348.1:NM_181699.2:c.1319cCg>cTg_NP_859050.1:p.440P>L | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | PRO | A:427 | A:427 | 77.0 | 0.531 | H | -61.6 | -30.5 | 77.0 | 0.531 | 0.0 |
HOH |
3.397 |
CG |
O |
||
PRO | B:427 | B:427 | 69.0 | 0.476 | H | -61.3 | -34.7 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | PRO | A:428 | A:428 | 18.0 | 0.124 | H | -57.6 | -20.7 | 18.0 | 0.124 | 0.0 | ||||||
2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | PRO | A:428 | A:428 | 17.0 | 0.117 | H | -52.8 | -30.3 | 17.0 | 0.117 | 0.0 |
HOH |
9.066 |
CG |
O |
||
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | PRO | A:428 | A:428 | 13.0 | 0.09 | H | -45.4 | -37.3 | NA | NA | NA | ||||||
PRO | D:428 | D:428 | 13.0 | 0.09 | H | -39.3 | -44.3 | 13.0 | 0.09 | 0.0 | |||||||||||||
3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | PRO | A:428 | A:428 | 22.0 | 0.152 | H | -54.3 | -29.6 | 22.0 | 0.152 | 0.0 |
HOH |
8.866 |
CG |
O |
||
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | PRO | A:428 | A:428 | 20.0 | 0.138 | H | -62.4 | -25.2 | 20.0 | 0.138 | 0.0 | ||||||
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | PRO | A:428 | A:428 | 7.0 | 0.048 | H | -42.4 | -47.6 | 7.0 | 0.048 | 0.0 | ||||||
7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | PRO | J:428 | P:428 | 6.0 | 0.041 | H | -57.8 | -20.0 | 6.0 | 0.041 | 0.0 | ||||||
7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | PRO | A:428 | A:428 | 13.0 | 0.09 | H | -66.8 | -34.6 | 13.0 | 0.09 | 0.0 | ||||||
7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | PRO | EA:428 | p:428 | 40.0 | 0.276 | H | -60.9 | -30.0 | 40.0 | 0.276 | 0.0 | ||||||
3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | PRO | A:427 | A:428 | 9.0 | 0.062 | H | -55.1 | -49.0 | 9.0 | 0.062 | 0.0 | ||||||
2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | PRO | A:428 | A:428 | 15.0 | 0.103 | H | -54.5 | -52.9 | 15.0 | 0.103 | 0.0 | ||||||
PRO | D:428 | D:428 | 8.0 | 0.055 | H | -59.5 | -50.3 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | PRO | A:428 | A:428 | 20.0 | 0.138 | G | -61.1 | -22.0 | 20.0 | 0.138 | 0.0 | ||||||
PRO | B:428 | B:428 | 30.0 | 0.207 | H | -53.8 | -36.3 | NA | NA | NA | |||||||||||||
PRO | C:428 | C:428 | 62.0 | 0.428 | G | -55.2 | -32.2 | NA | NA | NA | |||||||||||||
PRO | D:428 | D:428 | 25.0 | 0.172 | T | -72.4 | -23.4 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | PRO | A:429 | A:428 | 19.0 | 0.131 | H | -61.7 | -35.9 | 19.0 | 0.131 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | PRO | A:426 | A:428 | 15.0 | 0.103 | H | -64.4 | -52.2 | 15.0 | 0.103 | 0.0 | ||||||
PRO | B:426 | B:428 | 16.0 | 0.11 | H | -72.4 | -31.8 | 16.0 | 0.11 | 0.0 | |||||||||||||
PRO | E:426 | E:428 | 9.0 | 0.062 | H | -69.6 | -25.8 | NA | NA | NA | |||||||||||||
PRO | F:426 | F:428 | 10.0 | 0.069 | H | -61.2 | -55.0 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | PRO | A:421 | A:428 | 19.0 | 0.131 | H | -31.2 | -35.3 | 19.0 | 0.131 | 0.0 | ||||||
PRO | D:421 | D:428 | 17.0 | 0.117 | H | -30.8 | -30.5 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | PRO | A:421 | A:428 | 13.0 | 0.09 | H | -40.2 | -22.7 | 13.0 | 0.09 | 0.0 | ||||||
PRO | D:421 | D:428 | 9.0 | 0.062 | H | -34.3 | -32.6 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | PRO | A:423 | A:428 | 15.0 | 0.103 | H | -63.4 | -43.0 | 15.0 | 0.103 | 0.0 |
HOH |
3.286 |
CD |
O |
||
PRO | D:423 | D:428 | 12.0 | 0.083 | H | -60.4 | -40.9 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | PRO | A:423 | A:428 | 21.0 | 0.145 | H | -58.9 | -43.4 | 21.0 | 0.145 | 0.0 |
HOH |
3.357 |
CD |
O |
||
PRO | D:423 | D:428 | 10.0 | 0.069 | H | -61.7 | -36.9 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | PRO | A:421 | A:428 | 28.0 | 0.193 | H | -53.7 | -31.2 | 28.0 | 0.193 | 0.0 | ||||||
PRO | D:421 | D:428 | 24.0 | 0.166 | H | -62.2 | -14.9 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | PRO | A:424 | A:428 | 23.0 | 0.159 | H | -60.4 | -44.9 | 23.0 | 0.159 | 0.0 | ||||||
PRO | D:424 | D:428 | 19.0 | 0.131 | H | -61.0 | -42.8 | NA | NA | NA | |||||||||||||
PRO | G:424 | G:428 | 21.0 | 0.145 | H | -60.9 | -35.8 | NA | NA | NA | |||||||||||||
PRO | J:424 | J:428 | 26.0 | 0.179 | T | -63.7 | -36.9 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | PRO | A:419 | A:428 | 11.0 | 0.076 | H | -53.3 | -52.4 | 11.0 | 0.076 | 0.0 | ||||||
PRO | B:419 | B:428 | 18.0 | 0.124 | H | -47.9 | -44.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | PRO | A:440 | A:440 | 17.0 | 0.117 | H | -65.4 | -33.2 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | PRO | A:428 | A:428 | 10.0 | 0.069 | H | -62.8 | -36.7 |