Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111623019 | . | T | A | CCDS8348.1:NM_181699.2:c.1202gAt>gTt_NP_859050.1:p.401D>V | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | ASP | A:388 | A:388 | 73.0 | 0.487 | H | -43.9 | -60.5 | 73.0 | 0.487 | 0.0 |
HOH |
2.689 |
OD1 |
O |
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ASP | B:388 | B:388 | 93.0 | 0.62 | H | -51.6 | -44.4 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | ASP | A:389 | A:389 | 69.0 | 0.46 | H | -36.0 | -67.0 | 69.0 | 0.46 | 0.0 | ||||||
2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | ASP | A:389 | A:389 | 71.0 | 0.473 | H | -48.5 | -49.7 | 71.0 | 0.473 | 0.0 | ||||||
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | ASP | A:389 | A:389 | 74.0 | 0.493 | H | -42.1 | -26.0 | NA | NA | NA | ||||||
ASP | D:389 | D:389 | 78.0 | 0.52 | H | -56.9 | -31.1 | 78.0 | 0.52 | 0.0 | |||||||||||||
3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | ASP | A:389 | A:389 | 72.0 | 0.48 | H | -48.6 | -43.9 | 72.0 | 0.48 | 0.0 | ||||||
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | ASP | A:389 | A:389 | 71.0 | 0.473 | H | -46.1 | -46.4 | 71.0 | 0.473 | 0.0 | ||||||
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | ASP | A:389 | A:389 | 64.0 | 0.427 | G | -83.2 | 15.6 | 64.0 | 0.427 | 0.0 | ||||||
7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | ASP | J:389 | P:389 | 83.0 | 0.553 | S | -83.9 | -23.5 | 83.0 | 0.553 | 0.0 | ||||||
7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | ASP | A:389 | A:389 | 52.0 | NA | H | -61.4 | -53.1 | 52.0 | NA | NA | ||||||
7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | ASP | EA:389 | p:389 | 44.0 | NA | H | -64.9 | -36.2 | 44.0 | NA | NA | ||||||
3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | ASP | A:388 | A:389 | 52.0 | 0.347 | H | -60.6 | -40.0 | 52.0 | 0.347 | 0.0 |
HOH |
8.749 |
N |
O |
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2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | ASP | A:389 | A:389 | 85.0 | 0.567 | H | -57.0 | -36.8 | 85.0 | 0.567 | 0.0 | ||||||
ASP | D:389 | D:389 | 58.0 | 0.387 | H | -65.7 | -24.9 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | ASP | A:389 | A:389 | 99.0 | 0.66 | S | -96.4 | -55.5 | 99.0 | 0.66 | 0.0 | ||||||
ASP | B:389 | B:389 | 83.0 | 0.553 | H | -68.1 | -43.2 | NA | NA | NA | |||||||||||||
ASP | C:389 | C:389 | 85.0 | 0.567 | T | -70.3 | -54.9 | NA | NA | NA | |||||||||||||
ASP | D:389 | D:389 | 107.0 | 0.713 | H | -63.8 | -35.3 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | ASP | A:390 | A:389 | 94.0 | 0.627 | H | -69.7 | -24.7 | 94.0 | 0.627 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | ASP | A:387 | A:389 | 81.0 | 0.54 | H | -81.6 | -24.3 | 81.0 | 0.54 | 0.0 | ||||||
ASP | B:387 | B:389 | 73.0 | 0.487 | H | -62.2 | -27.8 | 73.0 | 0.487 | 0.0 | |||||||||||||
ASP | E:387 | E:389 | 92.0 | 0.613 | H | -62.9 | -24.9 | NA | NA | NA | |||||||||||||
ASP | F:387 | F:389 | 60.0 | 0.4 | -86.0 | -21.3 | NA | NA | NA | ||||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | ASP | A:382 | A:389 | 80.0 | 0.533 | H | -52.3 | -23.3 | 80.0 | 0.533 | 0.0 | ||||||
ASP | D:382 | D:389 | 86.0 | 0.573 | H | -62.9 | -10.9 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | ASP | A:382 | A:389 | 76.0 | 0.507 | H | -47.2 | -17.0 | 76.0 | 0.507 | 0.0 | ||||||
ASP | D:382 | D:389 | 82.0 | 0.547 | H | -60.2 | -5.3 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | ASP | A:384 | A:389 | 121.0 | 0.807 | H | -52.0 | -44.7 | 121.0 | 0.807 | 0.0 |
HOH |
6.399 |
N |
O |
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ASP | D:384 | D:389 | 109.0 | 0.727 | H | -48.5 | -52.8 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | ASP | A:384 | A:389 | 113.0 | 0.753 | H | -43.7 | -33.6 | 113.0 | 0.753 | 0.0 |
HOH |
3.117 |
N |
O |
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ASP | D:384 | D:389 | 116.0 | 0.773 | T | -57.1 | 100.1 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | ASP | A:382 | A:389 | 88.0 | 0.587 | H | -39.7 | -37.2 | 88.0 | 0.587 | 0.0 | ||||||
ASP | D:382 | D:389 | 97.0 | 0.647 | H | -44.8 | -27.5 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | ASP | A:385 | A:389 | 77.0 | 0.513 | H | -66.7 | -32.1 | 77.0 | 0.513 | 0.0 | ||||||
ASP | D:385 | D:389 | 99.0 | 0.66 | H | -61.0 | -35.1 | NA | NA | NA | |||||||||||||
ASP | G:385 | G:389 | 106.0 | 0.707 | H | -62.0 | -40.1 | NA | NA | NA | |||||||||||||
ASP | J:385 | J:389 | 96.0 | 0.64 | H | -61.8 | -19.6 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | ASP | A:380 | A:389 | 68.0 | 0.453 | H | -32.4 | -24.9 | 68.0 | 0.453 | 0.0 | ||||||
ASP | B:380 | B:389 | 75.0 | 0.5 | H | -35.6 | -30.0 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | ASP | A:401 | A:401 | 67.0 | 0.447 | H | -58.3 | -46.2 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | ASP | A:389 | A:389 | 105.0 | 0.7 | H | -63.7 | -45.3 |