Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111624270 | . | T | A | CCDS8348.1:NM_181699.2:c.1061aAa>aTa_NP_859050.1:p.354K>I | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | LYS | A:341 | A:341 | 31.0 | 0.155 | H | -61.3 | -34.9 | 31.0 | 0.155 | 0.0 |
HOH |
3.140 |
NZ |
O |
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LYS | B:341 | B:341 | 30.0 | 0.15 | H | -53.1 | -39.3 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | LYS | A:342 | A:342 | 18.0 | 0.09 | H | -47.5 | -38.7 | 18.0 | 0.09 | 0.0 | ||||||
2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | LYS | A:342 | A:342 | 17.0 | 0.085 | H | -50.2 | -34.8 | 17.0 | 0.085 | 0.0 | ||||||
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | LYS | A:342 | A:342 | 30.0 | 0.15 | H | -63.9 | -57.5 | NA | NA | NA | ||||||
LYS | D:342 | D:342 | 34.0 | 0.17 | H | -54.8 | -57.4 | 34.0 | 0.17 | 0.0 | |||||||||||||
3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | LYS | A:342 | A:342 | 11.0 | 0.055 | H | -51.9 | -32.7 | 11.0 | 0.055 | 0.0 | ||||||
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | LYS | A:342 | A:342 | 15.0 | 0.075 | H | -49.3 | -39.8 | 15.0 | 0.075 | 0.0 | ||||||
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | LYS | A:342 | A:342 | 41.0 | 0.205 | H | -66.9 | -38.7 | 41.0 | 0.205 | 0.0 | ||||||
7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | LYS | J:342 | P:342 | 18.0 | 0.09 | H | -64.9 | -43.4 | 18.0 | 0.09 | 0.0 | ||||||
7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | LYS | A:342 | A:342 | 76.0 | NA | H | -64.8 | -43.6 | 76.0 | NA | NA | ||||||
7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | LYS | EA:342 | p:342 | 29.0 | 0.145 | H | -64.6 | -40.2 | 29.0 | 0.145 | 0.0 | ||||||
3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | LYS | A:341 | A:342 | 30.0 | 0.15 | H | -63.4 | -31.3 | 30.0 | 0.15 | 0.0 |
HOH |
4.629 |
NZ |
O |
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2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | LYS | A:342 | A:342 | 30.0 | 0.15 | H | -53.0 | -50.2 | 30.0 | 0.15 | 0.0 | ||||||
LYS | D:342 | D:342 | 30.0 | 0.15 | H | -52.3 | -55.6 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | LYS | A:342 | A:342 | 29.0 | 0.145 | H | -61.9 | -51.6 | 29.0 | 0.145 | 0.0 | ||||||
LYS | B:342 | B:342 | 26.0 | 0.13 | H | -52.5 | -43.0 | NA | NA | NA | |||||||||||||
LYS | C:342 | C:342 | 33.0 | 0.165 | H | -50.4 | -40.4 | NA | NA | NA | |||||||||||||
LYS | D:342 | D:342 | 30.0 | 0.15 | H | -55.3 | -35.7 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | LYS | A:343 | A:342 | 24.0 | 0.12 | H | -43.1 | -48.2 | 24.0 | 0.12 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | LYS | A:340 | A:342 | 39.0 | 0.195 | H | -56.1 | -46.5 | 39.0 | 0.195 | 0.0 | ||||||
LYS | B:340 | B:342 | 34.0 | 0.17 | H | -58.2 | -48.1 | 34.0 | 0.17 | 0.0 | |||||||||||||
LYS | E:340 | E:342 | 25.0 | 0.125 | H | -56.5 | -47.8 | NA | NA | NA | |||||||||||||
LYS | F:340 | F:342 | 26.0 | 0.13 | H | -55.8 | -44.9 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | LYS | A:335 | A:342 | 20.0 | 0.1 | H | -72.5 | -39.0 | 20.0 | 0.1 | 0.0 | ||||||
LYS | D:335 | D:342 | 28.0 | 0.14 | H | -54.0 | -44.2 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | LYS | A:335 | A:342 | 21.0 | 0.105 | H | -65.8 | -48.7 | 21.0 | 0.105 | 0.0 | ||||||
LYS | D:335 | D:342 | 25.0 | 0.125 | H | -55.3 | -53.4 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | LYS | A:337 | A:342 | 24.0 | 0.12 | H | -62.1 | -37.6 | 24.0 | 0.12 | 0.0 |
HOH |
3.542 |
CD |
O |
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LYS | D:337 | D:342 | 15.0 | 0.075 | H | -63.8 | -37.1 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | LYS | A:337 | A:342 | 21.0 | 0.105 | H | -60.4 | -54.5 | 21.0 | 0.105 | 0.0 | ||||||
LYS | D:337 | D:342 | 27.0 | 0.135 | H | -58.6 | -47.8 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | LYS | A:335 | A:342 | 16.0 | 0.08 | H | -51.4 | -42.5 | 16.0 | 0.08 | 0.0 | ||||||
LYS | D:335 | D:342 | 15.0 | 0.075 | H | -56.1 | -31.0 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | LYS | A:338 | A:342 | 8.0 | 0.04 | H | -75.4 | -23.7 | 8.0 | 0.04 | 0.0 | ||||||
LYS | D:338 | D:342 | 18.0 | 0.09 | H | -61.6 | -33.4 | NA | NA | NA | |||||||||||||
LYS | G:338 | G:342 | 16.0 | 0.08 | H | -65.7 | -35.0 | NA | NA | NA | |||||||||||||
LYS | J:338 | J:342 | 11.0 | 0.055 | H | -83.3 | -24.7 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | LYS | A:333 | A:342 | 23.0 | 0.115 | H | -50.1 | -63.2 | 23.0 | 0.115 | 0.0 | ||||||
LYS | B:333 | B:342 | 29.0 | 0.145 | H | -49.2 | -56.5 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | LYS | A:354 | A:354 | 33.0 | 0.165 | H | -59.5 | -41.8 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | LYS | A:342 | A:342 | 28.0 | 0.14 | H | -62.0 | -40.9 |