Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111625752 | . | T | A | CCDS8348.1:NM_181699.2:c.910Aaa>Taa_NP_859050.1:p.304K>* | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | LYS | A:291 | A:291 | 107.0 | 0.535 | T | -117.1 | 28.8 | 107.0 | 0.535 | 0.0 |
HOH |
2.814 |
NZ |
O |
||
LYS | B:291 | B:291 | 102.0 | 0.51 | T | -112.1 | 13.0 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | LYS | A:292 | A:292 | 133.0 | 0.665 | T | -113.4 | 7.7 | 133.0 | 0.665 | 0.0 | ||||||
2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | LYS | A:292 | A:292 | 117.0 | 0.585 | T | -126.3 | 16.1 | 117.0 | 0.585 | 0.0 |
HOH |
2.799 |
NZ |
O |
||
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | LYS | A:292 | A:292 | 120.0 | 0.6 | T | -105.5 | 0.7 | NA | NA | NA | ||||||
LYS | D:292 | D:292 | 125.0 | 0.625 | T | -104.6 | 5.0 | 125.0 | 0.625 | 0.0 | |||||||||||||
3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | LYS | A:292 | A:292 | 120.0 | 0.6 | T | -114.2 | 9.0 | 120.0 | 0.6 | 0.0 |
HOH |
2.927 |
NZ |
O |
||
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | LYS | A:292 | A:292 | 121.0 | 0.605 | T | -108.6 | 10.5 | 121.0 | 0.605 | 0.0 | ||||||
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | LYS | A:292 | A:292 | 125.0 | 0.625 | T | -96.7 | 18.5 | 125.0 | 0.625 | 0.0 | ||||||
7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | LYS | J:292 | P:292 | 100.0 | 0.5 | S | -122.1 | 42.8 | 100.0 | 0.5 | 0.0 | ||||||
7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | LYS | A:292 | A:292 | 102.0 | NA | -113.3 | 360.0 | 102.0 | NA | NA | |||||||
7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | LYS | EA:292 | p:292 | 52.0 | NA | T | -111.5 | 39.0 | 52.0 | NA | NA | ||||||
3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | LYS | A:291 | A:292 | 139.0 | 0.695 | T | -111.0 | 14.3 | 139.0 | 0.695 | 0.0 | ||||||
2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | LYS | A:292 | A:292 | 96.0 | 0.48 | T | -105.2 | 21.0 | 96.0 | 0.48 | 0.0 | ||||||
LYS | D:292 | D:292 | 96.0 | 0.48 | T | -116.1 | 23.2 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | LYS | A:292 | A:292 | 107.0 | 0.535 | T | -114.9 | 14.9 | 107.0 | 0.535 | 0.0 | ||||||
LYS | B:292 | B:292 | 94.0 | 0.47 | T | -122.0 | -1.4 | NA | NA | NA | |||||||||||||
LYS | C:292 | C:292 | 131.0 | 0.655 | T | -84.2 | -11.7 | NA | NA | NA | |||||||||||||
LYS | D:292 | D:292 | 117.0 | 0.585 | T | -105.7 | -6.7 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | LYS | A:293 | A:292 | 128.0 | 0.64 | T | -122.5 | 16.6 | 128.0 | 0.64 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | LYS | A:290 | A:292 | 130.0 | 0.65 | T | -106.5 | 23.7 | 130.0 | 0.65 | 0.0 | ||||||
LYS | B:290 | B:292 | 116.0 | 0.58 | T | -100.4 | 27.5 | 116.0 | 0.58 | 0.0 | |||||||||||||
LYS | E:290 | E:292 | 115.0 | 0.575 | T | -101.3 | 25.6 | NA | NA | NA | |||||||||||||
LYS | F:290 | F:292 | 146.0 | 0.73 | T | -106.8 | 25.4 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | LYS | A:285 | A:292 | 131.0 | 0.655 | T | -105.6 | 30.7 | 131.0 | 0.655 | 0.0 | ||||||
LYS | D:285 | D:292 | 140.0 | 0.7 | T | -101.1 | 23.0 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | LYS | A:285 | A:292 | 120.0 | 0.6 | T | -115.4 | 32.2 | 120.0 | 0.6 | 0.0 | ||||||
LYS | D:285 | D:292 | 124.0 | 0.62 | T | -107.9 | 30.7 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | LYS | A:287 | A:292 | 141.0 | 0.705 | T | -106.1 | 12.2 | 141.0 | 0.705 | 0.0 |
HOH |
4.838 |
C |
O |
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LYS | D:287 | D:292 | 124.0 | 0.62 | T | -115.8 | 12.9 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | LYS | A:287 | A:292 | 121.0 | 0.605 | T | -114.4 | 41.3 | 121.0 | 0.605 | 0.0 |
HOH |
4.482 |
O |
O |
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LYS | D:287 | D:292 | 130.0 | 0.65 | T | -107.1 | 11.8 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | LYS | A:285 | A:292 | 113.0 | 0.565 | T | -118.0 | 22.7 | 113.0 | 0.565 | 0.0 | ||||||
LYS | D:285 | D:292 | 108.0 | 0.54 | T | -117.1 | 21.9 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | LYS | A:288 | A:292 | 122.0 | 0.61 | T | -139.0 | 48.7 | 122.0 | 0.61 | 0.0 | ||||||
LYS | D:288 | D:292 | 115.0 | 0.575 | T | -90.1 | 11.5 | NA | NA | NA | |||||||||||||
LYS | G:288 | G:292 | 115.0 | 0.575 | T | -96.7 | 24.2 | NA | NA | NA | |||||||||||||
LYS | J:288 | J:292 | 114.0 | 0.57 | T | -140.7 | 46.4 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | LYS | A:283 | A:292 | 136.0 | 0.68 | T | -93.9 | -1.8 | 136.0 | 0.68 | 0.0 | ||||||
LYS | B:283 | B:292 | 128.0 | 0.64 | T | -101.0 | 19.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | LYS | A:304 | A:304 | 101.0 | 0.505 | T | -104.8 | 17.9 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | LYS | A:292 | A:292 | 108.0 | 0.54 | T | -108.0 | 15.0 |