Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111631692 | . | C | A | CCDS8348.1:NM_181699.2:c.390gaG>gaT_NP_859050.1:p.130E>D | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | GLU | A:117 | A:117 | 87.0 | 0.458 | T | -88.5 | -13.0 | 87.0 | 0.458 | 0.0 |
HOH |
5.680 |
N |
O |
||
GLU | B:117 | B:117 | 85.0 | 0.447 | T | -79.2 | -12.1 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | GLU | A:118 | A:118 | 83.0 | 0.437 | T | -89.3 | -35.2 | 83.0 | 0.437 | 0.0 | ||||||
2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | GLU | A:118 | A:118 | 86.0 | 0.453 | T | -81.3 | -30.8 | 86.0 | 0.453 | 0.0 | ||||||
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | GLU | A:118 | A:118 | 83.0 | 0.437 | T | -77.7 | -13.6 | NA | NA | NA | ||||||
GLU | D:118 | D:118 | 85.0 | 0.447 | T | -78.1 | -9.4 | 85.0 | 0.447 | 0.0 | |||||||||||||
3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | GLU | A:118 | A:118 | 82.0 | 0.432 | T | -76.1 | -35.3 | 82.0 | 0.432 | 0.0 | ||||||
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | GLU | A:118 | A:118 | 88.0 | 0.463 | T | -72.4 | -39.3 | 88.0 | 0.463 | 0.0 | ||||||
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | GLU | A:118 | A:118 | 118.0 | 0.621 | T | -94.6 | -22.6 | 118.0 | 0.621 | 0.0 | ||||||
7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | GLU | J:118 | P:118 | 65.0 | 0.342 | S | -81.1 | -0.9 | 65.0 | 0.342 | 0.0 | ||||||
7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | GLU | A:118 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | GLU | EA:118 | p:118 | 55.0 | 0.289 | G | -83.8 | -8.0 | 55.0 | 0.289 | 0.0 | ||||||
3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | GLU | A:117 | A:118 | 86.0 | 0.453 | T | -83.1 | -7.9 | 86.0 | 0.453 | 0.0 |
HOH |
3.373 |
O |
O |
||
2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | GLU | A:118 | A:118 | 90.0 | 0.474 | S | -88.8 | 69.6 | 90.0 | 0.474 | 0.0 | ||||||
GLU | D:118 | D:118 | 95.0 | 0.5 | T | -96.9 | -8.2 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | GLU | A:118 | A:118 | 87.0 | 0.458 | T | -92.1 | -16.4 | 87.0 | 0.458 | 0.0 | ||||||
GLU | B:118 | B:118 | 72.0 | 0.379 | T | -98.9 | -16.4 | NA | NA | NA | |||||||||||||
GLU | C:118 | C:118 | 86.0 | 0.453 | T | -67.2 | -24.9 | NA | NA | NA | |||||||||||||
GLU | D:118 | D:118 | 83.0 | 0.437 | T | -85.6 | -12.3 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | GLU | A:119 | A:118 | 81.0 | 0.426 | T | -88.7 | -13.9 | 81.0 | 0.426 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | GLU | A:116 | A:118 | 89.0 | 0.468 | T | -94.9 | 19.6 | 89.0 | 0.468 | 0.0 | ||||||
GLU | B:116 | B:118 | 77.0 | 0.405 | T | -90.1 | -11.1 | 77.0 | 0.405 | 0.0 | |||||||||||||
GLU | E:116 | E:118 | 80.0 | 0.421 | T | -90.9 | -11.8 | NA | NA | NA | |||||||||||||
GLU | F:116 | F:118 | 79.0 | 0.416 | T | -96.4 | 17.6 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | GLU | A:111 | A:118 | 71.0 | 0.374 | G | -94.8 | -28.1 | 71.0 | 0.374 | 0.0 | ||||||
GLU | D:111 | D:118 | 76.0 | 0.4 | T | -81.2 | -27.8 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | GLU | A:111 | A:118 | 79.0 | 0.416 | T | -91.2 | -9.8 | 79.0 | 0.416 | 0.0 | ||||||
GLU | D:111 | D:118 | 82.0 | 0.432 | T | -84.3 | -11.0 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | GLU | A:113 | A:118 | 84.0 | 0.442 | T | -88.1 | -12.8 | 84.0 | 0.442 | 0.0 |
HOH |
3.671 |
O |
O |
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GLU | D:113 | D:118 | 91.0 | 0.479 | T | -98.5 | -8.3 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | GLU | A:113 | A:118 | 83.0 | 0.437 | T | -95.2 | -22.6 | 83.0 | 0.437 | 0.0 |
HOH |
6.239 |
O |
O |
||
GLU | D:113 | D:118 | 87.0 | 0.458 | T | -73.4 | -12.4 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | GLU | A:111 | A:118 | 69.0 | 0.363 | T | -134.0 | -5.0 | 69.0 | 0.363 | 0.0 | ||||||
GLU | D:111 | D:118 | 80.0 | 0.421 | T | -132.0 | -3.5 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | GLU | A:114 | A:118 | 69.0 | 0.363 | T | -72.6 | -12.6 | 69.0 | 0.363 | 0.0 | ||||||
GLU | D:114 | D:118 | 80.0 | 0.421 | T | -79.1 | -15.4 | NA | NA | NA | |||||||||||||
GLU | G:114 | G:118 | 95.0 | 0.5 | H | -66.9 | -17.5 | NA | NA | NA | |||||||||||||
GLU | J:114 | J:118 | 77.0 | 0.405 | G | -81.3 | 4.9 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | GLU | A:109 | A:118 | 81.0 | 0.426 | T | -71.6 | 20.3 | 81.0 | 0.426 | 0.0 | ||||||
GLU | B:109 | B:118 | 72.0 | 0.379 | H | -63.3 | -11.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | GLU | A:130 | A:130 | 80.0 | 0.421 | H | -81.9 | -27.5 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | GLU | A:118 | A:118 | 84.0 | 0.442 | T | -84.4 | -17.2 |