Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111631733 | . | G | A | CCDS8348.1:NM_181699.2:c.349Cgt>Tgt_NP_859050.1:p.117R>C | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | ARG | A:104 | A:104 | 21.0 | 0.093 | H | -54.8 | -39.4 | 21.0 | 0.093 | 0.0 |
HOH |
2.857 |
NE |
O |
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| ARG | B:104 | B:104 | 26.0 | 0.116 | H | -61.8 | -44.3 | NA | NA | NA | |||||||||||||
| 2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | ARG | A:105 | A:105 | 14.0 | 0.062 | H | -51.8 | -36.5 | 14.0 | 0.062 | 0.0 | ||||||
| 2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | ARG | A:105 | A:105 | 6.0 | 0.027 | H | -55.5 | -39.9 | 6.0 | 0.027 | 0.0 | ||||||
| 2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | ARG | A:105 | A:105 | 21.0 | 0.093 | H | -57.5 | -22.6 | NA | NA | NA | ||||||
| ARG | D:105 | D:105 | 24.0 | 0.107 | H | -50.8 | -25.2 | 12.0 | 0.053 | 0.054 |
E:Q13362:0.053 |
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| 3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | ARG | A:105 | A:105 | 12.0 | 0.053 | H | -56.0 | -33.0 | 12.0 | 0.053 | 0.0 | ||||||
| 3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | ARG | A:105 | A:105 | 16.0 | 0.071 | H | -54.0 | -37.6 | 16.0 | 0.071 | 0.0 | ||||||
| 6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | ARG | A:105 | A:105 | 42.0 | 0.187 | H | -69.3 | -35.1 | 42.0 | 0.187 | 0.0 |
L2J |
8.087 |
NH2 |
C10 |
||
| 7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | ARG | J:105 | P:105 | 29.0 | 0.129 | H | -67.4 | -41.3 | 29.0 | 0.129 | 0.0 | ||||||
| 7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | ARG | A:105 | A:105 | 28.0 | 0.124 | H | -66.8 | -23.0 | 28.0 | 0.124 | 0.0 | ||||||
| 7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | ARG | EA:105 | p:105 | 33.0 | 0.147 | H | -63.1 | -52.9 | 33.0 | 0.147 | 0.0 | ||||||
| 3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | ARG | A:104 | A:105 | 23.0 | 0.102 | H | -69.1 | -30.0 | 12.0 | 0.053 | 0.049 |
B:Q13362:0.049 |
HOH |
7.985 |
CD |
O |
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| 2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | ARG | A:105 | A:105 | 23.0 | 0.102 | H | -71.6 | -30.8 | 19.0 | 0.084 | 0.018 |
B:Q13362:0.018 |
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| ARG | D:105 | D:105 | 7.0 | 0.031 | H | -68.0 | -30.6 | NA | NA | NA | |||||||||||||
| 2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | ARG | A:105 | A:105 | 24.0 | 0.107 | H | -50.6 | -53.7 | 24.0 | 0.107 | 0.0 | ||||||
| ARG | B:105 | B:105 | 14.0 | 0.062 | H | -53.7 | -45.8 | NA | NA | NA | |||||||||||||
| ARG | C:105 | C:105 | 20.0 | 0.089 | H | -42.1 | -46.6 | NA | NA | NA | |||||||||||||
| ARG | D:105 | D:105 | 18.0 | 0.08 | H | -60.4 | -35.3 | NA | NA | NA | |||||||||||||
| 6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | ARG | A:106 | A:105 | 15.0 | 0.067 | H | -67.7 | -56.5 | 15.0 | 0.067 | 0.0 | ||||||
| 6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | ARG | A:103 | A:105 | 21.0 | 0.093 | H | -55.4 | -48.1 | 21.0 | 0.093 | 0.0 | ||||||
| ARG | B:103 | B:105 | 21.0 | 0.093 | H | -54.5 | -46.6 | 21.0 | 0.093 | 0.0 | |||||||||||||
| ARG | E:103 | E:105 | 22.0 | 0.098 | H | -55.2 | -50.1 | NA | NA | NA | |||||||||||||
| ARG | F:103 | F:105 | 18.0 | 0.08 | H | -54.8 | -48.9 | NA | NA | NA | |||||||||||||
| 2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | ARG | A:98 | A:105 | 13.0 | 0.058 | H | -59.6 | -27.5 | 8.0 | 0.036 | 0.022 |
B:Q13362:0.022 |
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| ARG | D:98 | D:105 | 11.0 | 0.049 | H | -59.8 | -25.3 | NA | NA | NA | |||||||||||||
| 2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | ARG | A:98 | A:105 | 16.0 | 0.071 | H | -67.4 | -17.7 | 9.0 | 0.04 | 0.031 |
B:Q13362:0.031 |
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| ARG | D:98 | D:105 | 16.0 | 0.071 | H | -68.4 | -19.6 | NA | NA | NA | |||||||||||||
| 4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | ARG | A:100 | A:105 | 11.0 | 0.049 | H | -50.6 | -47.8 | 5.0 | 0.022 | 0.027 |
B:Q9Y5P8+Q99741:0.027 |
HOH |
2.910 |
NE |
O |
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| ARG | D:100 | D:105 | 14.0 | 0.062 | H | -50.8 | -45.9 | NA | NA | NA | |||||||||||||
| 4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | ARG | A:100 | A:105 | 10.0 | 0.044 | H | -54.7 | -41.4 | 4.0 | 0.018 | 0.026 |
B:Q9Y5P8+Q99741:0.027 |
HOH |
5.023 |
NH1 |
O |
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| ARG | D:100 | D:105 | 15.0 | 0.067 | H | -51.7 | -38.6 | NA | NA | NA | |||||||||||||
| 3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | ARG | A:98 | A:105 | 11.0 | 0.049 | H | -52.5 | -47.9 | 10.0 | 0.044 | 0.005 |
B:P63151:0.004 |
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| ARG | D:98 | D:105 | 9.0 | 0.04 | H | -60.8 | -42.0 | NA | NA | NA | |||||||||||||
| 5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | ARG | A:101 | A:105 | 17.0 | 0.076 | H | -76.0 | -48.0 | 17.0 | 0.076 | 0.0 | ||||||
| ARG | D:101 | D:105 | 13.0 | 0.058 | H | -66.9 | -44.1 | NA | NA | NA | |||||||||||||
| ARG | G:101 | G:105 | 16.0 | 0.071 | H | -62.6 | -50.5 | NA | NA | NA | |||||||||||||
| ARG | J:101 | J:105 | 7.0 | 0.031 | H | -64.2 | -35.7 | NA | NA | NA | |||||||||||||
| 2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | ARG | A:96 | A:105 | 16.0 | 0.071 | H | -53.8 | -16.5 | 13.0 | 0.058 | 0.013 |
C:P03081:0.013 |
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| ARG | B:96 | B:105 | 21.0 | 0.093 | H | -66.3 | -12.7 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | ARG | A:117 | A:117 | 6.0 | 0.027 | H | -60.8 | -45.9 | |
| af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | ARG | A:105 | A:105 | 13.0 | 0.058 | H | -59.4 | -45.3 | |