Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111635566 | . | C | A | CCDS8348.1:NM_181699.2:c.269gGc>gTc_NP_859050.1:p.90G>V | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | THR | A:77 | A:77 | 109.0 | 0.779 | G | -60.9 | -49.2 | 109.0 | 0.779 | 0.0 |
HOH |
5.010 |
N |
O |
||
THR | B:77 | B:77 | 107.0 | 0.764 | G | -66.5 | -42.3 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | THR | A:78 | A:78 | 104.0 | 0.743 | T | -80.8 | -52.3 | 104.0 | 0.743 | 0.0 | ||||||
2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | THR | A:78 | A:78 | 109.0 | 0.779 | G | -65.6 | -35.3 | 109.0 | 0.779 | 0.0 | ||||||
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | THR | A:78 | A:78 | 109.0 | 0.779 | T | -84.4 | -56.1 | NA | NA | NA | ||||||
THR | D:78 | D:78 | 111.0 | 0.793 | T | -83.9 | -59.4 | 111.0 | 0.793 | 0.0 | |||||||||||||
3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | THR | A:78 | A:78 | 111.0 | 0.793 | G | -66.2 | -31.2 | 111.0 | 0.793 | 0.0 | ||||||
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | THR | A:78 | A:78 | 109.0 | 0.779 | G | -67.7 | -24.8 | 109.0 | 0.779 | 0.0 | ||||||
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | THR | A:78 | A:78 | 110.0 | 0.786 | T | -98.7 | -30.4 | 110.0 | 0.786 | 0.0 | ||||||
7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | THR | J:78 | P:78 | 116.0 | 0.829 | T | -111.5 | 17.4 | 116.0 | 0.829 | 0.0 | ||||||
7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | THR | A:78 | A:78 | 99.0 | 0.707 | S | -108.1 | -46.2 | 99.0 | 0.707 | 0.0 | ||||||
7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | THR | EA:78 | p:78 | 112.0 | 0.8 | H | -78.3 | -16.2 | 112.0 | 0.8 | 0.0 | ||||||
3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | THR | A:77 | A:78 | 120.0 | 0.857 | T | -64.3 | -37.8 | 120.0 | 0.857 | 0.0 |
HOH |
2.847 |
OG1 |
O |
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2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | THR | A:78 | A:78 | 97.0 | 0.693 | S | -112.0 | -22.6 | 97.0 | 0.693 | 0.0 | ||||||
THR | D:78 | D:78 | 122.0 | 0.871 | T | -81.5 | -23.7 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | THR | A:78 | A:78 | 122.0 | 0.871 | G | -71.0 | 3.7 | 122.0 | 0.871 | 0.0 | ||||||
THR | B:78 | B:78 | 117.0 | 0.836 | H | -72.1 | 14.3 | NA | NA | NA | |||||||||||||
THR | C:78 | C:78 | 114.0 | 0.814 | H | -74.6 | -23.1 | NA | NA | NA | |||||||||||||
THR | D:78 | D:78 | 109.0 | 0.779 | T | -74.1 | -18.1 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | THR | A:79 | A:78 | 108.0 | 0.771 | T | -85.8 | -34.6 | 108.0 | 0.771 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | THR | A:76 | A:78 | 112.0 | 0.8 | G | -74.1 | -32.8 | 112.0 | 0.8 | 0.0 | ||||||
THR | B:76 | B:78 | 116.0 | 0.829 | G | -67.9 | -40.8 | 116.0 | 0.829 | 0.0 |
HOH |
8.330 |
CG2 |
O |
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THR | E:76 | E:78 | 101.0 | 0.721 | G | -69.8 | -41.0 | NA | NA | NA | |||||||||||||
THR | F:76 | F:78 | 107.0 | 0.764 | G | -74.0 | -29.5 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | THR | A:71 | A:78 | 111.0 | 0.793 | T | -60.9 | -63.8 | 111.0 | 0.793 | 0.0 | ||||||
THR | D:71 | D:78 | 105.0 | 0.75 | T | -70.2 | -57.4 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | THR | A:71 | A:78 | 105.0 | 0.75 | H | -78.6 | -66.9 | 105.0 | 0.75 | 0.0 | ||||||
THR | D:71 | D:78 | 107.0 | 0.764 | T | -85.8 | -61.7 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | THR | A:73 | A:78 | 119.0 | 0.85 | H | -61.3 | -43.0 | 119.0 | 0.85 | 0.0 |
HOH |
2.801 |
N |
O |
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THR | D:73 | D:78 | 114.0 | 0.814 | G | -60.6 | -48.6 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | THR | A:73 | A:78 | 113.0 | 0.807 | T | -74.7 | -50.6 | 113.0 | 0.807 | 0.0 | ||||||
THR | D:73 | D:78 | 106.0 | 0.757 | G | -71.9 | -34.2 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | THR | A:71 | A:78 | 117.0 | 0.836 | G | -71.7 | -39.5 | 117.0 | 0.836 | 0.0 | ||||||
THR | D:71 | D:78 | 118.0 | 0.843 | G | -61.4 | -38.2 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | THR | A:74 | A:78 | 119.0 | 0.85 | H | -64.2 | -21.5 | 119.0 | 0.85 | 0.0 | ||||||
THR | D:74 | D:78 | 119.0 | 0.85 | H | -67.0 | -23.9 | NA | NA | NA | |||||||||||||
THR | G:74 | G:78 | 123.0 | 0.879 | G | -78.7 | -8.0 | NA | NA | NA | |||||||||||||
THR | J:74 | J:78 | 109.0 | 0.779 | G | -71.5 | -31.6 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | THR | A:69 | A:78 | 88.0 | 0.629 | S | -96.8 | -40.3 | 88.0 | 0.629 | 0.0 | ||||||
THR | B:69 | B:78 | 87.0 | 0.621 | S | -110.0 | -49.5 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | GLY | A:90 | A:90 | 60.0 | 0.8 | G | -65.6 | -28.5 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | THR | A:78 | A:78 | 118.0 | 0.843 | T | -67.6 | -35.4 |