Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 111636973 | . | T | A | CCDS8348.1:NM_181699.2:c.113cAg>cTg_NP_859050.1:p.38Q>L | Homo sapiens protein phosphatase 2 scaffold subunit Abeta (PPP2R1B), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1b3u | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
1999-04-12 | GLN | A:25 | A:25 | 105.0 | 0.583 | H | -48.8 | -17.3 | 105.0 | 0.583 | 0.0 |
HOH |
9.247 |
N |
O |
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GLN | B:25 | B:25 | 94.0 | 0.522 | H | -60.5 | -30.7 | NA | NA | NA | |||||||||||||
2ie3 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | GLN | A:26 | A:26 | 7.0 | 0.039 | -54.6 | 149.6 | 7.0 | 0.039 | 0.0 | |||||||
2ie4 | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-11-07 | GLN | A:26 | A:26 | 7.0 | 0.039 | -70.4 | 161.4 | 7.0 | 0.039 | 0.0 | |||||||
2npp | 1 | Q96DH3 | 86.22 | 0.0 |
X-RAY |
2006-12-12 | GLN | A:26 | A:26 | 139.0 | 0.772 | H | -27.7 | -57.0 | NA | NA | NA | ||||||
GLN | D:26 | D:26 | 149.0 | 0.828 | H | -28.6 | -54.1 | 129.0 | 0.717 | 0.111 |
F:P67775:0.111 |
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3k7v | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | GLN | A:26 | A:26 | 10.0 | 0.056 | -73.4 | 151.7 | 10.0 | 0.056 | 0.0 | |||||||
3k7w | 1 | P30153 | 86.22 | 0.0 |
X-RAY |
2009-11-03 | GLN | A:26 | A:26 | 13.0 | 0.072 | -55.7 | 158.1 | 13.0 | 0.072 | 0.0 | |||||||
6nts | 1 | P30153 | 86.22 | 0.0 |
EM |
2020-05-06 | GLN | A:26 | A:26 | 115.0 | 0.639 | H | -68.3 | -44.5 | 102.0 | 0.567 | 0.072 |
C:P67775:0.011 B:Q15172:0.061 |
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7cun | 10 | P30153 | 86.22 | 0.0 |
EM |
2020-11-25 | GLN | J:26 | P:26 | 135.0 | 0.75 | H | -65.5 | -41.8 | 81.0 | 0.45 | 0.3 |
K:P67775:0.3 |
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7k36 | 1 | P30153 | 86.22 | 0.0 |
EM |
2021-03-10 | GLN | A:26 | A:26 | 59.0 | NA | H | -73.8 | -44.6 | 59.0 | NA | NA | ||||||
7pks | 31 | P30153 | 86.22 | 0.0 |
EM |
2021-12-08 | GLN | EA:26 | p:26 | 114.0 | 0.633 | H | -69.0 | -36.7 | 62.0 | 0.344 | 0.289 |
FA:P67775:0.289 |
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3fga | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2009-09-22 | GLN | A:25 | A:26 | 98.0 | 0.544 | H | -59.3 | -32.1 | 74.0 | 0.411 | 0.133 |
C:P67775:0.133 |
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2iae | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2006-12-26 | GLN | A:26 | A:26 | 96.0 | 0.533 | H | -70.9 | -21.6 | 95.0 | 0.528 | 0.005 |
C:P67775:0.006 |
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GLN | D:26 | D:26 | 131.0 | 0.728 | T | -94.0 | -33.7 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 86.22 | 0.0 |
X-RAY |
2007-08-07 | GLN | A:26 | A:26 | 118.0 | 0.656 | T | -73.6 | 23.4 | 118.0 | 0.656 | 0.0 | ||||||
GLN | B:26 | B:26 | 97.0 | 0.539 | H | -59.2 | -21.0 | NA | NA | NA | |||||||||||||
GLN | C:26 | C:26 | 81.0 | 0.45 | H | -67.3 | -22.1 | NA | NA | NA | |||||||||||||
GLN | D:26 | D:26 | 68.0 | 0.378 | T | -92.6 | 21.9 | NA | NA | NA | |||||||||||||
6ef4 | 1 | Q76MZ3 | 85.93 | 0.0 |
X-RAY |
2019-06-26 | GLN | A:27 | A:26 | 110.0 | 0.611 | H | -81.8 | -28.0 | 110.0 | 0.611 | 0.0 | ||||||
6iur | 1 | P30153 | 85.86 | 0.0 |
X-RAY |
2019-12-04 | GLN | A:24 | A:26 | 131.0 | 0.728 | H | -63.4 | -25.4 | 131.0 | 0.728 | 0.0 | ||||||
GLN | B:24 | B:26 | 107.0 | 0.594 | H | -68.5 | -27.7 | 107.0 | 0.594 | 0.0 | |||||||||||||
GLN | E:24 | E:26 | 98.0 | 0.544 | H | -68.5 | -29.0 | NA | NA | NA | |||||||||||||
GLN | F:24 | F:26 | 118.0 | 0.656 | H | -66.9 | -26.3 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | GLN | A:19 | A:26 | 126.0 | 0.7 | H | -47.1 | -40.0 | 126.0 | 0.7 | 0.0 | ||||||
GLN | D:19 | D:26 | 120.0 | 0.667 | H | -38.0 | -49.0 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 86.43 | 0.0 |
X-RAY |
2006-12-12 | GLN | A:19 | A:26 | 133.0 | 0.739 | H | -60.4 | -31.3 | 133.0 | 0.739 | 0.0 | ||||||
GLN | D:19 | D:26 | 129.0 | 0.717 | H | -55.0 | -40.0 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | GLN | A:21 | A:26 | 135.0 | 0.75 | H | -59.2 | -38.6 | 135.0 | 0.75 | 0.0 |
HOH |
5.197 |
N |
O |
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GLN | D:21 | D:26 | 121.0 | 0.672 | H | -75.7 | -29.9 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 86.13 | 0.0 |
X-RAY |
2013-05-08 | GLN | A:21 | A:26 | 124.0 | 0.689 | H | -75.7 | -20.7 | 124.0 | 0.689 | 0.0 | ||||||
GLN | D:21 | D:26 | 114.0 | 0.633 | H | -62.8 | -27.8 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2008-10-07 | GLN | A:19 | A:26 | 111.0 | 0.617 | H | -72.1 | -37.5 | 111.0 | 0.617 | 0.0 | ||||||
GLN | D:19 | D:26 | 134.0 | 0.744 | H | -68.5 | -28.6 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 86.4 | 0.0 |
X-RAY |
2018-01-17 | GLN | A:22 | A:26 | 92.0 | 0.511 | H | -51.8 | -46.3 | 92.0 | 0.511 | 0.0 | ||||||
GLN | D:22 | D:26 | 98.0 | 0.544 | H | -58.3 | -50.9 | NA | NA | NA | |||||||||||||
GLN | G:22 | G:26 | 105.0 | 0.583 | H | -54.4 | -33.2 | NA | NA | NA | |||||||||||||
GLN | J:22 | J:26 | 101.0 | 0.561 | H | -70.8 | -40.0 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 86.38 | 0.0 |
X-RAY |
2007-05-15 | GLN | A:17 | A:26 | 113.0 | 0.628 | T | -55.6 | -20.1 | 113.0 | 0.628 | 0.0 | ||||||
GLN | B:17 | B:26 | 107.0 | 0.594 | H | -48.5 | -15.8 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30154-f1 | 1 | P30154 | 100.0 | 0.0 | GLN | A:38 | A:38 | 98.0 | 0.544 | H | -67.9 | -35.1 | |
af-p30153-f1 | 1 | P30153 | 86.22 | 0.0 | GLN | A:26 | A:26 | 149.0 | 0.828 | H | -66.5 | -36.9 |