Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 114183120 . C A CCDS8368.1:NM_006169.2:c.716tCg>tAg_NP_006160.1:p.239S>* Homo sapiens nicotinamide N-methyltransferase (NNMT), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5yjf 1 P40261 98.86 0.0 X-RAY
2018-03-21 SER A:259 A:239 108.0 0.939 -74.3 -32.4 108.0 0.939 0.0 HOH
2.948
O
O
SER B:259 B:239 111.0 0.965 -75.8 -11.3 NA NA NA
SER C:259 C:239 86.0 NA -78.8 -24.6 NA NA NA
SER D:259 D:239 104.0 0.904 -75.4 -43.0 NA NA NA
2iip 1 P40261 98.86 0.0 X-RAY
2006-10-10 SER A:258 A:239 111.0 0.965 -90.1 -16.4 111.0 0.965 0.0 HOH
2.984
OG
O
SER B:258 B:239 114.0 0.991 -83.6 -18.7 NA NA NA
SER C:258 C:239 117.0 1.0 -72.7 -28.9 NA NA NA
SER D:258 D:239 114.0 0.991 -78.0 -27.8 NA NA NA
3rod 1 P40261 98.86 0.0 X-RAY
2011-09-07 SER A:258 A:239 111.0 0.965 -82.6 -29.4 111.0 0.965 0.0 HOH
3.874
O
O
SER B:258 B:239 109.0 0.948 -73.0 -21.0 NA NA NA
SER C:258 C:239 106.0 0.922 -49.2 -25.4 NA NA NA
SER D:258 D:239 111.0 0.965 -57.4 -50.6 NA NA NA
6b1a 1 P40261 98.86 0.0 X-RAY
2018-01-31 SER A:258 A:239 115.0 1.0 -77.7 -24.8 115.0 1.0 0.0 HOH
3.347
N
O
SER B:258 B:239 114.0 0.991 -89.3 -17.4 NA NA NA
SER C:258 C:239 112.0 0.974 -87.5 -18.0 NA NA NA
SER D:258 D:239 112.0 0.974 -80.1 -27.2 NA NA NA
6chh 1 P40261 98.86 0.0 X-RAY
2018-06-13 SER A:258 A:239 116.0 1.0 -76.0 -24.0 55.0 0.478 0.522 D:P40261:0.53
HOH
3.402
N
O
SER B:258 B:239 118.0 1.0 -86.9 -16.8 NA NA NA
SER C:258 C:239 112.0 0.974 -86.1 -20.6 59.0 0.513 0.461 B:P40261:0.461
HOH
3.344
OG
O
SER D:258 D:239 114.0 0.991 -81.3 -24.9 65.0 0.565 0.426 A:P40261:0.426
HOH
3.574
N
O
6orr 1 Q6FH49 98.86 0.0 X-RAY
2019-10-23 SER A:258 A:239 115.0 1.0 -88.5 -16.8 115.0 1.0 0.0 HOH
3.240
O
O
SER B:258 B:239 111.0 0.965 -89.2 -17.0 NA NA NA
SER C:258 C:239 113.0 0.983 -90.2 -14.3 NA NA NA
SER D:258 D:239 111.0 0.965 -88.6 -16.6 NA NA NA
6pve 1 Q6FH49 98.86 0.0 X-RAY
2019-11-27 SER A:258 A:239 116.0 1.0 -77.2 -26.2 116.0 1.0 0.0 HOH
3.264
N
O
SER B:258 B:239 114.0 0.991 -78.7 -25.0 NA NA NA
SER C:258 C:239 115.0 1.0 -78.5 -24.8 NA NA NA
SER D:258 D:239 113.0 0.983 -79.0 -23.4 NA NA NA
6pvs 1 Q6FH49 98.86 0.0 X-RAY
2019-11-27 SER A:258 A:239 111.0 0.965 -72.4 -33.9 111.0 0.965 0.0
SER B:258 B:239 117.0 1.0 S -71.1 -33.4 NA NA NA
SER C:258 C:239 114.0 0.991 -70.4 -31.8 NA NA NA
SER D:258 D:239 111.0 0.965 -75.2 -35.9 NA NA NA
7bkg 1 P40261 98.86 0.0 X-RAY
2021-03-17 SER A:258 A:239 113.0 0.983 -86.1 -20.0 113.0 0.983 0.0 HOH
2.861
OG
O
SER B:258 B:239 116.0 1.0 -81.5 -21.3 NA NA NA
SER C:258 C:239 114.0 0.991 -80.4 -30.1 NA NA NA
SER D:258 D:239 109.0 0.948 -91.3 -17.5 NA NA NA
7ble 1 P40261 98.86 0.0 X-RAY
2021-03-17 SER A:258 A:239 113.0 0.983 -82.1 -13.6 113.0 0.983 0.0 HOH
3.542
O
O
SER B:258 B:239 110.0 0.957 -82.7 -1.4 NA NA NA
SER C:258 C:239 115.0 1.0 -79.7 -25.2 NA NA NA
SER D:258 D:239 116.0 1.0 -75.1 -21.7 NA NA NA
7nbj 1 P40261 98.86 0.0 X-RAY
2021-03-17 SER A:258 A:239 114.0 0.991 -82.7 -13.6 114.0 0.991 0.0 HOH
3.042
OG
O
SER B:258 B:239 112.0 0.974 -84.1 -18.6 NA NA NA
SER C:258 C:239 114.0 0.991 -75.1 -23.6 NA NA NA
SER D:258 D:239 110.0 0.957 -80.0 -11.5 NA NA NA
7nbm 1 P40261 98.86 0.0 X-RAY
2021-03-17 SER A:258 A:239 108.0 0.939 -87.3 -17.2 108.0 0.939 0.0 HOH
7.235
O
O
SER B:258 B:239 115.0 1.0 -81.3 -14.8 NA NA NA
SER C:258 C:239 110.0 0.957 -94.1 8.0 NA NA NA
SER D:258 D:239 112.0 0.974 -88.2 6.0 NA NA NA
7nbq 1 P40261 98.86 0.0 X-RAY
2021-03-17 SER A:258 A:239 116.0 1.0 -83.5 -8.8 116.0 1.0 0.0 HOH
3.350
N
O
SER B:258 B:239 113.0 0.983 -74.7 -15.7 NA NA NA
SER C:258 C:239 114.0 0.991 -82.4 -13.9 NA NA NA
SER D:258 D:239 107.0 0.93 -82.8 -10.5 NA NA NA
7egu 1 P40261 99.61 0.0 X-RAY
2021-12-15 SER A:238 A:239 13.0 0.113 S -153.7 164.5 13.0 0.113 0.0 HOH
2.818
OG
O
7ehz 1 P40261 99.61 0.0 X-RAY
2021-12-15 SER A:238 NA:NA DO NA DO DO DO NA NA NA
5xvq 1 F7ERX8 96.97 0.0 X-RAY
2017-08-02 SER A:259 A:239 104.0 0.904 -93.7 54.2 104.0 0.904 0.0 HOH
3.448
O
O
SER B:259 B:239 99.0 0.861 -96.2 44.7 NA NA NA
2i62 1 O55239 85.5 7e-168 X-RAY
2006-09-12 SER A:240 A:240 110.0 0.957 -77.9 70.2 110.0 0.957 0.0 HOH
2.820
N
O
SER B:240 B:240 99.0 0.861 -88.7 65.5 NA NA NA
SER C:240 C:240 97.0 0.843 -91.3 33.9 NA NA NA
SER D:240 D:240 97.0 0.843 -78.7 -8.7 NA NA NA
5xvk 1 O55239 85.5 2e-167 X-RAY
2017-08-02 SER A:259 A:239 92.0 0.8 -82.4 4.3 92.0 0.8 0.0 HOH
2.563
OG
O
SER B:259 B:239 108.0 0.939 -80.6 20.6 NA NA NA
5yji 1 O55239 85.5 2e-167 X-RAY
2018-03-21 SER A:259 A:239 100.0 0.87 -82.7 22.8 100.0 0.87 0.0 HOH
4.373
O
O
SER B:259 B:239 98.0 0.852 -87.2 34.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p40261-f1 1 P40261 100.0 0.0 SER A:239 A:239 99.0 0.861 -77.7 31.4