Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 12958720 | . | A | C | CCDS7810.2:NM_021961.5:c.1232aAt>aCt_NP_068780.2:p.411N>T | Homo sapiens TEA domain transcription factor 1 (TEAD1), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 7cmm | 1 | P28347 | 99.55 | 1e-167 |
X-RAY |
2021-02-03 | ASN | A:215 | A:411 | 132.0 | 0.825 | -88.4 | 109.6 | 132.0 | 0.825 | 0.0 | |||||||
| ASN | B:215 | B:411 | 154.0 | 0.963 | -74.5 | -32.7 | NA | NA | NA | ||||||||||||||
| ASN | C:215 | C:411 | 133.0 | 0.831 | -81.6 | -24.4 | NA | NA | NA | ||||||||||||||
| ASN | D:215 | D:411 | 146.0 | 0.912 | -73.6 | -32.8 | NA | NA | NA | ||||||||||||||
| 4re1 | 1 | P28347 | 99.54 | 3e-166 |
X-RAY |
2014-11-19 | ASN | A:205 | A:396 | 105.0 | NA | -131.0 | 11.7 | 105.0 | NA | NA |
HOH |
4.827 |
CB |
O |
|||
| ASN | B:205 | B:396 | 160.0 | 1.0 | -133.1 | 13.3 | NA | NA | NA | ||||||||||||||
| 3kys | 1 | P28347 | 100.0 | 4e-166 |
X-RAY |
2010-02-23 | ASN | A:204 | A:396 | 118.0 | 0.738 | -100.1 | -1.3 | 118.0 | 0.738 | 0.0 |
HOH |
9.244 |
C |
O |
|||
| ASN | C:204 | C:396 | 135.0 | 0.844 | -83.5 | -12.8 | NA | NA | NA | ||||||||||||||
| 6im5 | 1 | P28347 | 99.55 | 3e-165 |
X-RAY |
2019-02-06 | ASN | A:218 | A:411 | 120.0 | 0.75 | S | -82.4 | -15.1 | 120.0 | 0.75 | 0.0 |
HOH |
2.802 |
OD1 |
O |
||
| ASN | B:218 | B:411 | 112.0 | 0.7 | -110.2 | -8.7 | NA | NA | NA | ||||||||||||||
| 6hil | 1 | P28347 | 99.54 | 4e-165 |
X-RAY |
2019-04-03 | ASN | A:204 | A:396 | 154.0 | 0.963 | -101.4 | -10.3 | 147.0 | 0.919 | 0.044 |
B:P46937:0.044 |
HOH |
6.308 |
OD1 |
O |
||
| ASN | C:204 | D:396 | 125.0 | 0.781 | -100.5 | -24.7 | NA | NA | NA | ||||||||||||||
| ASN | E:204 | B:396 | 116.0 | 0.725 | -110.3 | -9.7 | NA | NA | NA | ||||||||||||||
| ASN | G:204 | C:396 | 146.0 | 0.912 | -94.3 | -29.3 | NA | NA | NA | ||||||||||||||
| 7li5 | 1 | E9PKB7 | 100.0 | 5e-164 |
X-RAY |
2022-02-02 | ASN | A:207 | A:411 | 133.0 | 0.831 | -111.7 | 11.6 | 133.0 | 0.831 | 0.0 |
HOH |
2.615 |
OD1 |
O |
|||
| ASN | B:207 | B:411 | 114.0 | 0.713 | -111.3 | 10.4 | NA | NA | NA | ||||||||||||||
| 6ge3 | 1 | Q15561 | 81.74 | 5e-136 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 81.0 | 0.704 | -114.1 | -12.1 | 81.0 | 0.704 | 0.0 |
HOH |
2.922 |
N |
O |
|||
| 6gec | 1 | Q15561 | 81.74 | 5e-136 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 53.0 | 0.461 | -106.4 | -44.6 | 53.0 | 0.461 | 0.0 |
HOH |
2.676 |
N |
O |
|||
| 4ln0 | 1 | Q62296 | 82.19 | 5e-136 |
X-RAY |
2014-02-26 | ALA | A:207 | A:412 | 89.0 | 0.774 | S | -71.0 | -22.8 | 89.0 | 0.774 | 0.0 |
GOL |
6.497 |
CB |
O3 |
||
| ALA | B:207 | B:412 | 93.0 | 0.809 | S | -71.5 | -24.6 | 93.0 | 0.809 | 0.0 | |||||||||||||
| 6l9f | 1 | Q62296 | 82.19 | 5e-136 |
X-RAY |
2019-12-11 | ALA | A:207 | A:412 | 64.0 | 0.557 | -80.4 | 102.6 | 56.0 | 0.487 | 0.07 |
B:Q8N9Y4:0.07 |
HOH |
4.996 |
C |
O |
||
| ALA | C:207 | B:412 | 61.0 | 0.53 | -93.9 | 161.1 | NA | NA | NA | ||||||||||||||
| 6sba | 1 | Q62296 | 82.19 | 1e-135 |
X-RAY |
2020-09-30 | ALA | A:206 | A:412 | 19.0 | 0.165 | -58.6 | 156.3 | 19.0 | 0.165 | 0.0 |
GOL HOH |
9.488 4.166 |
O O |
H31 O |
|||
| 6ge5 | 1 | Q15561 | 81.28 | 2e-135 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 80.0 | 0.696 | -114.7 | -0.9 | 80.0 | 0.696 | 0.0 |
HOH |
2.835 |
N |
O |
|||
| 6geg | 1 | Q15561 | 81.28 | 2e-135 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 80.0 | 0.696 | -116.0 | 11.9 | 80.0 | 0.696 | 0.0 |
HOH |
2.804 |
N |
O |
|||
| 6gek | 1 | Q15561 | 81.28 | 2e-135 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 80.0 | 0.696 | -126.3 | 24.0 | 80.0 | 0.696 | 0.0 | |||||||
| ALA | C:204 | B:419 | 84.0 | 0.73 | -87.7 | 360.0 | NA | NA | NA | ||||||||||||||
| 3jua | 1 | Q62296 | 82.11 | 4e-135 |
X-RAY |
2010-02-23 | ALA | A:205 | A:412 | 86.0 | 0.748 | -89.8 | -29.2 | 86.0 | 0.748 | 0.0 |
HOH |
5.196 |
O |
O |
|||
| ALA | C:205 | C:412 | 91.0 | 0.791 | -73.8 | -28.8 | NA | NA | NA | ||||||||||||||
| ALA | E:205 | E:412 | 77.0 | 0.67 | -74.6 | -83.4 | NA | NA | NA | ||||||||||||||
| ALA | G:205 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5xjd | 1 | Q62296 | 82.11 | 4e-135 |
X-RAY |
2018-01-24 | ALA | A:205 | A:412 | 50.0 | 0.435 | -65.7 | 162.9 | 50.0 | 0.435 | 0.0 |
HOH |
3.140 |
O |
O |
|||
| ALA | B:205 | B:412 | 90.0 | 0.783 | S | -76.1 | -30.6 | 90.0 | 0.783 | 0.0 |
HOH |
2.873 |
N |
O |
|||||||||
| 6ge4 | 1 | Q15561 | 81.28 | 4e-135 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 80.0 | 0.696 | -93.0 | -29.5 | 80.0 | 0.696 | 0.0 |
HOH |
2.798 |
N |
O |
|||
| 6gee | 1 | Q15561 | 81.28 | 4e-135 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 54.0 | 0.47 | -112.7 | -21.7 | 54.0 | 0.47 | 0.0 |
HOH |
2.683 |
N |
O |
|||
| 6hik | 1 | Q15561 | 81.28 | 4e-135 |
X-RAY |
2019-04-03 | ALA | A:204 | A:419 | 107.0 | 0.93 | -114.4 | -0.2 | 107.0 | 0.93 | 0.0 |
HOH |
2.753 |
N |
O |
|||
| 5gn0 | 1 | Q62296 | 82.11 | 6e-135 |
X-RAY |
2017-05-31 | ALA | A:210 | A:412 | 100.0 | 0.87 | S | -67.6 | -37.1 | 84.0 | 0.73 | 0.14 |
E:Q9EPK5:0.139 |
|||||
| ALA | B:210 | B:412 | 97.0 | 0.843 | S | -67.4 | -28.1 | NA | NA | NA | |||||||||||||
| ALA | C:210 | C:412 | 87.0 | 0.757 | -129.7 | 41.2 | NA | NA | NA | ||||||||||||||
| ALA | D:210 | D:412 | 101.0 | 0.878 | S | -77.1 | -13.2 | NA | NA | NA | |||||||||||||
| 5oaq | 1 | Q15561 | 81.65 | 7e-135 |
X-RAY |
2017-10-11 | ALA | A:205 | A:419 | 82.0 | 0.713 | -117.0 | 3.7 | 82.0 | 0.713 | 0.0 |
HOH |
2.799 |
N |
O |
|||
| 6q2x | 1 | Q15561 | 81.65 | 7e-135 |
X-RAY |
2019-07-03 | ALA | A:205 | A:419 | 83.0 | 0.722 | -113.0 | -0.2 | 83.0 | 0.722 | 0.0 |
HOH |
2.811 |
N |
O |
|||
| 6q36 | 1 | Q15561 | 81.65 | 7e-135 |
X-RAY |
2019-07-03 | ALA | A:205 | A:419 | 82.0 | 0.713 | -120.9 | 20.4 | 70.0 | 0.609 | 0.104 |
C:None:0.104 |
HOH |
4.095 |
CB |
O |
||
| ALA | B:205 | B:419 | 94.0 | 0.817 | -121.6 | 15.1 | 82.0 | 0.713 | 0.104 |
D:None:0.104 |
HOH |
4.140 |
CB |
O |
|||||||||
| 5z2q | 4 | Q62296 | 82.49 | 1e-134 |
X-RAY |
2018-01-31 | ALA | D:214 | B:412 | 99.0 | 0.861 | S | -75.8 | -11.4 | 99.0 | 0.861 | 0.0 | ||||||
| 5z2q | 3 | Q62296 | 82.49 | 1e-134 |
X-RAY |
2018-01-31 | ALA | C:212 | A:412 | 95.0 | 0.826 | S | -72.2 | -13.5 | NA | NA | NA | ||||||
| 6ge6 | 1 | Q15561 | 80.82 | 2e-134 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 106.0 | 0.922 | -118.2 | 3.1 | 106.0 | 0.922 | 0.0 |
HOH |
2.705 |
N |
O |
|||
| 6gei | 1 | Q15561 | 80.82 | 2e-134 |
X-RAY |
2018-09-19 | ALA | A:204 | A:419 | 102.0 | 0.887 | -112.1 | -22.7 | 102.0 | 0.887 | 0.0 |
HOH |
2.810 |
N |
O |
|||
| 6sen | 1 | Q15561 | 81.19 | 4e-134 |
X-RAY |
2019-11-20 | ALA | A:205 | A:419 | 102.0 | 0.887 | -121.2 | 8.8 | 91.0 | 0.791 | 0.096 |
C:Q8N9Y4:0.096 |
SO4 HOH |
6.532 3.814 |
O C |
O2 O |
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| ALA | B:205 | B:419 | 90.0 | 0.783 | -116.2 | 4.7 | NA | NA | NA | ||||||||||||||
| 6seo | 1 | Q15561 | 81.19 | 4e-134 |
X-RAY |
2019-11-20 | ALA | A:205 | A:419 | 89.0 | 0.774 | -123.1 | 2.0 | 78.0 | 0.678 | 0.096 |
B:A6NEQ2:0.096 |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p28347-f1 | 1 | P28347 | 100.0 | 0.0 | ASN | A:411 | A:411 | 119.0 | 0.744 | -85.5 | -11.7 | ||