Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 67168247 . T A CCDS8160.1:NM_002708.3:c.331Aag>Tag_NP_002699.1:p.111K>* Homo sapiens protein phosphatase 1 catalytic subunit alpha (PPP1CA), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fjm 1 P08129 100.0 0.0 X-RAY
1996-06-20 LYS A:111 A:111 1.0 0.005 H -67.0 -44.2 1.0 0.005 0.0 HOH
3.631
NZ
O
LYS B:111 B:111 2.0 0.01 H -62.5 -40.2 NA NA NA
4g9j 1 P62136 100.0 0.0 X-RAY
2012-09-19 LYS A:112 A:111 1.0 0.005 H -59.5 -40.2 1.0 0.005 0.0
LYS B:112 B:111 1.0 0.005 H -70.3 -37.2 NA NA NA
6g0i 1 P62136 100.0 0.0 X-RAY
2018-11-21 LYS A:112 A:111 1.0 0.005 H -67.6 -38.0 1.0 0.005 0.0 HOH
3.755
CE
O
6g0j 1 P62136 100.0 0.0 X-RAY
2018-11-21 LYS A:112 A:111 1.0 0.005 H -75.1 -32.1 1.0 0.005 0.0 HOH
3.739
CE
O
5zqv 1 P62137 99.7 0.0 X-RAY
2019-03-13 LYS A:111 A:111 1.0 0.005 H -64.2 -35.0 1.0 0.005 0.0
LYS B:111 B:111 1.0 0.005 H -62.3 -32.3 NA NA NA
LYS C:111 C:111 1.0 0.005 H -62.4 -29.7 1.0 0.005 0.0
LYS D:111 D:111 1.0 0.005 H -59.4 -27.4 NA NA NA
6dcx 1 P62136 100.0 0.0 X-RAY
2019-05-15 LYS A:120 A:111 0.0 0.0 H -59.3 -38.9 0.0 0.0 0.0
LYS B:120 B:111 0.0 0.0 H -60.1 -38.3 NA NA NA
6zk6 1 P62136 99.7 0.0 X-RAY
2020-11-18 LYS A:112 A:111 1.0 0.005 H -64.9 -38.5 1.0 0.005 0.0 HOH
3.664
CE
O
3egg 1 P62136 100.0 0.0 X-RAY
2010-03-23 LYS A:110 A:111 2.0 0.01 H -60.3 -42.8 2.0 0.01 0.0 GOL
HOH
6.416
3.780
NZ
CE
C3
O
LYS B:110 B:111 1.0 0.005 H -58.6 -44.3 NA NA NA
3egh 1 P62136 100.0 0.0 X-RAY
2010-03-23 LYS A:110 A:111 2.0 0.01 H -64.1 -43.4 2.0 0.01 0.0 GOL
HOH
6.466
3.623
NZ
CE
C3
O
LYS B:110 B:111 1.0 0.005 H -57.3 -47.0 NA NA NA
3hvq 1 P62136 100.0 0.0 X-RAY
2010-03-23 LYS A:110 A:111 1.0 0.005 H -60.7 -41.6 1.0 0.005 0.0 HOH
3.696
CE
O
LYS B:110 B:111 1.0 0.005 H -67.6 -40.9 1.0 0.005 0.0 HOH
3.532
CE
O
6ghm 1 P62136 100.0 0.0 X-RAY
2019-02-27 LYS A:110 A:111 2.0 0.01 H -60.2 -41.8 2.0 0.01 0.0 EDO
HOH
6.800
3.566
NZ
NZ
C2
O
LYS B:110 B:111 2.0 0.01 H -62.6 -42.2 NA NA NA
3v4y 1 P62136 100.0 0.0 X-RAY
2012-10-31 LYS A:110 A:111 1.0 0.005 H -62.3 -41.1 1.0 0.005 0.0 GOL
GOL
HOH
7.510
4.515
2.778
HZ1
HZ3
HE2
H2
H31
O
LYS C:110 C:111 1.0 0.005 H -59.9 -39.4 NA NA NA
LYS E:110 E:111 2.0 0.01 H -63.6 -40.5 NA NA NA
LYS G:110 G:111 1.0 0.005 H -61.8 -45.5 NA NA NA
3n5u 1 P62136 100.0 0.0 X-RAY
2010-08-11 LYS A:111 A:111 1.0 0.005 H -66.2 -29.5 1.0 0.005 0.0
LYS B:111 B:111 0.0 0.0 H -66.8 -28.7 0.0 0.0 0.0
6obn 1 P62136 100.0 0.0 X-RAY
2019-09-18 LYS A:116 A:111 1.0 0.005 H -61.4 -41.9 1.0 0.005 0.0 MPD
HOH
9.272
3.803
C
NZ
C1
O
LYS B:116 B:111 1.0 0.005 H -61.4 -40.6 NA NA NA
6obp 1 P62136 100.0 0.0 X-RAY
2019-09-18 LYS A:116 A:111 2.0 0.01 H -65.2 -38.4 2.0 0.01 0.0 CL
HOH
6.623
6.512
O
NZ
CL
O
6zej 1 P62136,Q4VY12 100.0 0.0 X-RAY
2020-09-30 LYS A:110 D:110 1.0 0.005 H -71.9 -35.7 1.0 0.005 0.0 HOH
2.742
HE2
O
LYS B:110 A:110 1.0 0.005 H -67.1 -38.2 NA NA NA
LYS C:110 F:110 1.0 0.005 H -67.7 -37.9 NA NA NA
LYS D:110 I:110 2.0 0.01 H -67.7 -37.8 NA NA NA
LYS E:110 L:110 1.0 0.005 H -63.3 -41.2 NA NA NA
LYS F:110 O:110 1.0 0.005 H -61.3 -40.1 NA NA NA
6zeh 1 P62136,Q13813 100.0 0.0 X-RAY
2020-09-30 LYS A:110 A:111 2.0 0.01 H -64.0 -43.0 2.0 0.01 0.0 HOH
2.914
HE2
O
LYS C:110 B:111 1.0 0.005 H -59.5 -44.5 NA NA NA
1it6 1 P36873 90.66 0.0 X-RAY
2002-05-22 LYS A:111 A:111 2.0 0.01 H -65.2 -38.5 2.0 0.01 0.0 HOH
3.574
CE
O
LYS B:111 B:111 1.0 0.005 H -58.6 -44.6 NA NA NA
1jk7 1 P36873 90.66 0.0 X-RAY
2001-08-15 LYS A:111 A:111 1.0 0.005 H -62.7 -41.7 1.0 0.005 0.0 HOH
3.648
CE
O
2bcd 1 P36873 90.66 0.0 X-RAY
2006-01-17 LYS A:111 A:111 2.0 0.01 H -60.8 -40.6 2.0 0.01 0.0 HOH
3.650
CE
O
2bdx 1 P36873 90.66 0.0 X-RAY
2006-01-17 LYS A:111 A:111 2.0 0.01 H -65.0 -40.5 2.0 0.01 0.0 HOH
3.540
CE
O
4ut2 1 P36873 90.66 0.0 X-RAY
2015-07-22 LYS A:111 A:111 2.0 0.01 H -64.4 -41.8 2.0 0.01 0.0 HOH
3.532
NZ
O
LYS B:111 B:111 2.0 0.01 H -64.5 -41.2 NA NA NA
4ut3 1 P36873 90.66 0.0 X-RAY
2015-07-22 LYS A:111 A:111 3.0 0.015 H -64.6 -38.9 3.0 0.015 0.0 HOH
3.676
CE
O
4ut3 2 P36873 90.66 0.0 X-RAY
2015-07-22 LYS B:111 B:111 2.0 0.01 H -64.6 -39.3 NA NA NA
4v0u 2 P63087 90.66 0.0 X-RAY
2015-03-25 LYS D:111 D:111 2.0 0.01 H -59.7 -41.5 NA NA NA
LYS F:111 F:111 3.0 0.015 H -59.7 -41.5 NA NA NA
LYS H:111 H:111 2.0 0.01 H -59.6 -41.6 NA NA NA
LYS J:111 J:111 2.0 0.01 H -59.6 -41.6 2.0 0.01 0.0
LYS N:111 N:111 2.0 0.01 H -59.6 -41.5 NA NA NA
2o8a 1 P63088 90.63 0.0 X-RAY
2007-07-17 LYS A:117 A:111 1.0 0.005 H -66.4 -46.3 1.0 0.005 0.0 HOH
3.642
NZ
O
LYS C:117 B:111 2.0 0.01 H -68.2 -45.5 NA NA NA
2o8g 1 P63088 90.63 0.0 X-RAY
2007-07-17 LYS A:117 A:111 2.0 0.01 H -60.0 -48.0 2.0 0.01 0.0 HOH
3.808
CE
O
LYS C:117 B:111 2.0 0.01 H -63.6 -46.2 NA NA NA
6zeg 1 P62136,Q9UQB8 100.0 0.0 X-RAY
2020-09-30 LYS A:110 A:111 1.0 0.005 H -61.9 -41.6 1.0 0.005 0.0 HOH
2.794
HE2
O
LYS C:110 B:111 1.0 0.005 H -59.4 -43.6 NA NA NA
6zei 1 P62136,Q9UQB8 100.0 0.0 X-RAY
2020-09-30 LYS A:110 A:111 2.0 0.01 H -60.5 -41.5 2.0 0.01 0.0 HOH
2.950
HE2
O
LYS C:110 B:111 1.0 0.005 H -61.8 -42.1 NA NA NA
3e7a 1 P62136 99.66 0.0 X-RAY
2008-11-04 LYS A:110 A:111 2.0 0.01 H -62.2 -40.3 2.0 0.01 0.0 GOL
HOH
5.910
3.629
NZ
NZ
C3
O
LYS B:110 B:111 2.0 0.01 H -57.6 -44.5 NA NA NA
3e7b 1 P62136 99.66 0.0 X-RAY
2008-11-04 LYS A:110 A:111 2.0 0.01 H -61.5 -41.0 2.0 0.01 0.0 GOL
NA
HOH
5.956
7.718
3.479
NZ
N
NZ
O2
NA
O
LYS B:110 B:111 2.0 0.01 H -63.0 -42.0 NA NA NA
4mov 1 P62136 99.66 0.0 X-RAY
2014-03-26 LYS A:110 A:111 2.0 0.01 H -62.1 -40.6 2.0 0.01 0.0 CL
HOH
9.666
3.500
O
NZ
CL
O
LYS B:110 B:111 2.0 0.01 H -61.4 -41.6 NA NA NA
4moy 1 P62136 99.66 0.0 X-RAY
2014-03-26 LYS A:110 A:111 2.0 0.01 H -62.9 -43.6 2.0 0.01 0.0 GOL
HOH
6.258
3.510
NZ
CE
O2
O
4mp0 1 P62136 99.66 0.0 X-RAY
2014-03-26 LYS A:110 A:111 1.0 0.005 H -63.5 -44.1 1.0 0.005 0.0 GOL
HOH
6.331
3.729
NZ
CE
O2
O
LYS B:110 C:111 2.0 0.01 H -63.5 -44.6 NA NA NA
4xpn 1 P62136 99.66 0.0 X-RAY
2015-07-01 LYS A:110 A:111 1.0 0.005 H -61.2 -40.8 1.0 0.005 0.0 GOL
HOH
6.263
3.640
NZ
CE
O2
O
LYS C:110 C:111 2.0 0.01 H -62.4 -41.3 NA NA NA
5ioh 1 P62136 99.66 0.0 X-RAY
2016-10-05 LYS A:110 A:111 1.0 0.005 H -64.4 -41.5 1.0 0.005 0.0 HOH
3.745
CE
O
LYS C:110 C:111 2.0 0.01 H -64.2 -41.3 NA NA NA
6alz 1 P62136 99.66 0.0 X-RAY
2017-11-29 LYS A:110 A:111 2.0 0.01 H -63.8 -36.9 2.0 0.01 0.0 DMS
HOH
6.607
3.603
NZ
NZ
C2
O
LYS B:110 B:111 1.0 0.005 H -65.5 -37.8 NA NA NA
6czo 1 P62136 99.66 0.0 X-RAY
2019-01-23 LYS A:110 A:111 1.0 0.005 H -65.2 -34.3 1.0 0.005 0.0 HOH
3.444
NZ
O
LYS C:110 C:111 2.0 0.01 H -64.2 -33.9 NA NA NA
6dno 1 P62136 99.66 0.0 X-RAY
2019-01-23 LYS A:110 A:111 1.0 0.005 H -62.0 -41.7 1.0 0.005 0.0 HOH
3.738
CE
O
6zee 1 P62136 99.66 0.0 X-RAY
2020-09-30 LYS A:110 P:111 1.0 0.005 H -67.4 -36.6 1.0 0.005 0.0 EDO
HOH
9.040
2.928
N
HE2
HO1
O
LYS B:110 Q:111 1.0 0.005 H -70.2 -40.2 1.0 0.005 0.0 HOH
3.027
HZ1
O
LYS C:110 B:111 1.0 0.005 H -65.2 -39.7 1.0 0.005 0.0 EDO
HOH
9.122
3.134
N
HE2
H21
O
LYS D:110 A:111 1.0 0.005 H -64.6 -40.4 1.0 0.005 0.0 EDO
EDO
HOH
8.836
5.053
2.843
N
HZ3
HE2
HO2
H11
O
LYS E:110 I:111 2.0 0.01 H -67.0 -38.5 2.0 0.01 0.0 HOH
2.856
HE2
O
LYS F:110 K:111 2.0 0.01 H -58.4 -41.6 2.0 0.01 0.0 EDO
HOH
4.718
2.928
HZ1
HE2
H11
O
6zef 1 P62136 99.66 0.0 X-RAY
2020-09-30 LYS A:110 A:111 1.0 0.005 H -64.0 -38.7 1.0 0.005 0.0 EDO
EDO
EDO
HOH
7.156
4.939
8.885
3.110
HZ3
HZ2
N
HZ1
H21
H22
HO1
O
LYS B:110 B:111 2.0 0.01 H -62.1 -39.1 NA NA NA
5zt0 1 P62137 99.66 0.0 X-RAY
2019-03-13 LYS A:105 A:111 0.0 0.0 H -54.5 -54.6 0.0 0.0 0.0
LYS B:105 B:111 0.0 0.0 H -60.6 -51.7 NA NA NA
LYS C:105 C:111 0.0 0.0 H -58.6 -40.0 NA NA NA
LYS D:105 D:111 0.0 0.0 H -61.9 -53.3 NA NA NA
LYS E:105 E:111 0.0 0.0 H -53.0 -49.8 NA NA NA
LYS F:105 F:111 0.0 0.0 H -58.8 -46.3 NA NA NA
7nzm 2 P62139 99.66 0.0 EM
2021-09-29 LYS B:105 B:111 4.0 0.02 H -61.4 -40.1 4.0 0.02 0.0
6obq 1 P62136 99.66 0.0 X-RAY
2019-09-18 LYS A:110 A:111 3.0 0.015 H -62.6 -40.0 3.0 0.015 0.0 HOH
3.702
CE
O
LYS B:110 B:111 2.0 0.01 H -61.9 -40.5 NA NA NA
6obr 1 P62136 99.32 0.0 X-RAY
2019-09-18 LYS A:110 A:111 2.0 0.01 H -62.2 -41.2 2.0 0.01 0.0 HOH
3.569
NZ
O
LYS B:110 B:111 2.0 0.01 H -61.3 -41.3 NA NA NA
6obs 1 P62136 99.66 0.0 X-RAY
2019-09-18 LYS A:110 A:111 2.0 0.01 H -63.8 -43.0 2.0 0.01 0.0 HOH
3.585
CE
O
LYS B:110 B:111 1.0 0.005 H -62.0 -42.4 NA NA NA
6obu 1 P62136 99.66 0.0 X-RAY
2019-09-18 LYS A:110 A:111 2.0 0.01 H -62.1 -41.2 2.0 0.01 0.0 GOL
GOL
DMS
HOH
8.564
6.315
9.048
3.647
NZ
NZ
O
NZ
C3
C3
O
O
LYS B:110 B:111 2.0 0.01 H -62.4 -40.8 NA NA NA
1s70 1 P62140 88.79 0.0 X-RAY
2004-06-22 LYS A:113 A:111 1.0 0.005 H -64.7 -33.9 1.0 0.005 0.0 HOH
3.285
NZ
O
5inb 1 P36873 97.31 0.0 X-RAY
2016-10-05 LYS A:108 A:111 1.0 0.005 H -63.0 -39.9 1.0 0.005 0.0 GOL
HOH
6.049
3.619
NZ
CE
C1
O
5j28 1 P36873 97.31 0.0 X-RAY
2016-10-05 LYS A:108 A:111 0.0 0.0 H -66.6 -47.2 0.0 0.0 0.0 HOH
3.868
CE
O
LYS B:108 B:111 1.0 0.005 H -67.7 -40.4 NA NA NA
4v0v 1 P63087 97.62 0.0 X-RAY
2015-03-25 LYS A:106 A:111 2.0 0.01 H -59.9 -41.1 2.0 0.01 0.0 HOH
3.435
NZ
O
LYS C:106 C:111 2.0 0.01 H -60.0 -40.9 NA NA NA
4v0w 1 P63087 97.62 0.0 X-RAY
2015-03-25 LYS A:106 A:111 2.0 0.01 H -60.8 -40.6 2.0 0.01 0.0 HOH
3.449
NZ
O
LYS C:106 C:111 2.0 0.01 H -60.9 -40.4 NA NA NA
4v0x 1 P63087 97.62 0.0 X-RAY
2015-03-25 LYS A:106 A:111 2.0 0.01 H -62.2 -41.5 2.0 0.01 0.0 HOH
2.870
HZ1
O
1u32 1 P36873 96.25 0.0 X-RAY
2004-08-17 LYS A:106 A:111 1.0 0.005 H -64.3 -40.3 1.0 0.005 0.0 HOH
3.633
CE
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p62136-f1 1 P62136 100.0 0.0 LYS A:111 A:111 1.0 0.005 H -59.4 -39.2
af-p36873-f1 1 P36873 90.66 0.0 LYS A:111 A:111 1.0 0.005 H -59.0 -39.5
af-p62140-f1 1 P62140 88.79 0.0 LYS A:110 A:110 1.0 0.005 H -59.9 -39.6