Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 72295307 . T A CCDS8216.1:NM_002599.4:c.1588Agc>Tgc_NP_002590.1:p.530S>C Homo sapiens phosphodiesterase 2A (PDE2A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ibj 1 O00408 100.0 0.0 X-RAY
 2009-10-27 SER A:317 A:530 54.0 0.47 -38.6 138.1 54.0 0.47 0.0 HOH
 8.725
 O
 O
SER B:317 B:530 46.0 0.4 -48.3 130.9 46.0 0.4 0.0 HOH
 6.815
 C
 O
1mc0 1 Q922S4 94.72 0.0 X-RAY
 2002-10-02 SER A:317 A:523 52.0 0.452 -62.2 -179.7 52.0 0.452 0.0 HOH
 5.266
 OG
 O
3jab 2 ? 100.0 2e-128 EM
 2015-06-10 SER C:144 B:530 54.0 0.47 -48.2 130.8 54.0 0.47 0.0
SER D:144 N:530 52.0 0.452 -48.2 130.8 52.0 0.452 0.0
3jbq 5 ? 100.0 2e-128 EM
 2015-09-30 SER E:144 C:530 39.0 0.339 -94.2 171.7 39.0 0.339 0.0
SER H:144 G:530 35.0 0.304 -95.9 171.2 35.0 0.304 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00408-f1 1 O00408 100.0 0.0 SER A:530 A:530 40.0 0.348 -85.5 170.3