Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 72295690 . G A CCDS8216.1:NM_002599.4:c.1442gCa>gTa_NP_002590.1:p.481A>V Homo sapiens phosphodiesterase 2A (PDE2A), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ibj 1 O00408 100.0 0.0 X-RAY
 2009-10-27 ALA A:268 A:481 0.0 0.0 S -79.8 -24.6 0.0 0.0 0.0 HOH
 7.900
 O
 O
ALA B:268 B:481 40.0 0.348 -85.4 -21.3 40.0 0.348 0.0 HOH
 3.342
 O
 O
1mc0 1 Q922S4 94.72 0.0 X-RAY
 2002-10-02 ALA A:268 A:474 0.0 0.0 S -54.3 -59.3 0.0 0.0 0.0 PCG
HOH
 6.019
4.242
 CB
N
 O2'
O
3jab 2 ? 100.0 2e-128 EM
 2015-06-10 ALA C:95 B:481 39.0 0.339 -85.4 -21.3 39.0 0.339 0.0
ALA D:95 N:481 40.0 0.348 -85.4 -21.4 40.0 0.348 0.0
3jbq 5 ? 100.0 2e-128 EM
 2015-09-30 ALA E:95 C:481 18.0 0.157 -62.9 -29.9 18.0 0.157 0.0
ALA H:95 G:481 17.0 0.148 -62.3 -30.1 17.0 0.148 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00408-f1 1 O00408 100.0 0.0 ALA A:481 A:481 0.0 0.0 G -61.9 -39.3