Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 72295693 . T A CCDS8216.1:NM_002599.4:c.1439gAc>gTc_NP_002590.1:p.480D>V Homo sapiens phosphodiesterase 2A (PDE2A), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ibj 1 O00408 100.0 0.0 X-RAY
 2009-10-27 ASP A:267 A:480 77.0 0.513 -119.7 128.4 77.0 0.513 0.0 HOH
 9.750
 OD1
 O
ASP B:267 B:480 99.0 0.66 -119.7 140.6 99.0 0.66 0.0 HOH
 4.872
 O
 O
1mc0 1 Q922S4 94.72 0.0 X-RAY
 2002-10-02 ASP A:267 A:473 85.0 0.567 -142.6 98.8 85.0 0.567 0.0 PCG
HOH
 9.686
3.344
 C
OD1
 O2'
O
3jab 2 ? 100.0 2e-128 EM
 2015-06-10 ASP C:94 B:480 99.0 0.66 -119.7 140.6 99.0 0.66 0.0
ASP D:94 N:480 101.0 0.673 -119.7 140.6 101.0 0.673 0.0
3jbq 5 ? 100.0 2e-128 EM
 2015-09-30 ASP E:94 C:480 118.0 0.787 S -117.3 104.2 118.0 0.787 0.0
ASP H:94 G:480 119.0 0.793 S -116.7 105.3 119.0 0.793 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00408-f1 1 O00408 100.0 0.0 ASP A:480 A:480 88.0 0.587 -134.5 104.3