Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 72295748 . C A CCDS8216.1:NM_002599.4:c.1384Gat>Tat_NP_002590.1:p.462D>Y Homo sapiens phosphodiesterase 2A (PDE2A), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ibj 1 O00408 100.0 0.0 X-RAY
 2009-10-27 ASP A:249 A:462 103.0 0.687 T -115.0 22.6 103.0 0.687 0.0
ASP B:249 B:462 104.0 0.693 T -109.1 1.6 104.0 0.693 0.0 HOH
 6.886
 OD1
 O
1mc0 1 Q922S4 94.72 0.0 X-RAY
 2002-10-02 ASP A:249 A:455 109.0 0.727 T -129.7 -3.2 109.0 0.727 0.0 PCG
HOH
 8.424
3.772
 O
OD2
 O2A
O
3jab 2 ? 100.0 2e-128 EM
 2015-06-10 ASP C:76 B:462 103.0 0.687 T -109.2 1.6 103.0 0.687 0.0
ASP D:76 N:462 105.0 0.7 T -109.2 1.6 105.0 0.7 0.0
3jbq 5 ? 100.0 2e-128 EM
 2015-09-30 ASP E:76 C:462 109.0 0.727 S -82.2 -40.8 109.0 0.727 0.0
ASP H:76 G:462 111.0 0.74 S -81.9 -41.5 111.0 0.74 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00408-f1 1 O00408 100.0 0.0 ASP A:462 A:462 113.0 0.753 T -105.5 2.8