Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 72297116 . G A CCDS8216.1:NM_002599.4:c.1180Cag>Tag_NP_002590.1:p.394Q>* Homo sapiens phosphodiesterase 2A (PDE2A), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ibj 1 O00408 100.0 0.0 X-RAY
 2009-10-27 GLN A:181 A:394 92.0 0.511 H -50.8 -34.2 76.0 0.422 0.089 B:O00408:0.089
 HOH
 7.684
 NE2
 O
GLN B:181 B:394 97.0 0.539 H -53.2 -32.5 83.0 0.461 0.078 A:O00408:0.078
 HOH
 2.947
 O
 O
1mc0 1 Q922S4 94.72 0.0 X-RAY
 2002-10-02 GLN A:181 A:387 106.0 0.589 H -58.2 -34.7 106.0 0.589 0.0 HOH
 6.299
 N
 O
3jab 2 ? 100.0 2e-128 EM
 2015-06-10 GLN C:8 B:394 99.0 0.55 H -53.2 -32.5 83.0 0.461 0.089 D:None:0.078
B:None:0.044
GLN D:8 N:394 99.0 0.55 H -53.3 -32.5 85.0 0.472 0.078 A:None:0.022
C:None:0.078
3jbq 5 ? 100.0 2e-128 EM
 2015-09-30 GLN E:8 C:394 114.0 0.633 H -72.5 -20.3 61.0 0.339 0.294 H:None:0.111
L:None:0.167
K:None:0.094
GLN H:8 G:394 85.0 0.472 H -72.8 -15.7 61.0 0.339 0.133 E:None:0.006
K:None:0.133

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00408-f1 1 O00408 100.0 0.0 GLN A:394 A:394 120.0 0.667 H -64.9 -38.2