Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 72297170 . C A CCDS8216.1:NM_002599.4:c.1126Gtg>Ttg_NP_002590.1:p.376V>L Homo sapiens phosphodiesterase 2A (PDE2A), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ibj 1 O00408 100.0 0.0 X-RAY
2009-10-27 VAL A:163 A:376 51.0 0.329 H -52.1 -39.3 13.0 0.084 0.245 B:O00408:0.245
HOH
4.172
CB
O
VAL B:163 B:376 50.0 0.323 H -56.7 -46.7 13.0 0.084 0.239 A:O00408:0.239
HOH
4.444
CB
O
1mc0 1 Q922S4 94.72 0.0 X-RAY
2002-10-02 VAL A:163 A:369 59.0 0.381 H -64.9 -35.6 59.0 0.381 0.0 HOH
2.915
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00408-f1 1 O00408 100.0 0.0 VAL A:376 A:376 57.0 0.368 H -65.9 -43.0