Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 72300974 . C A CCDS8216.1:NM_002599.4:c.808Gac>Tac_NP_002590.1:p.270D>Y Homo sapiens phosphodiesterase 2A (PDE2A), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ibj 1 O00408 100.0 0.0 X-RAY
2009-10-27 ASP A:57 A:270 93.0 0.62 T -78.9 10.5 93.0 0.62 0.0
ASP B:57 B:270 92.0 0.613 T -85.1 9.0 92.0 0.613 0.0 HOH
6.612
O
O
1mc0 1 Q922S4 94.72 0.0 X-RAY
2002-10-02 ASP A:56 A:262 96.0 0.64 S -66.0 2.7 96.0 0.64 0.0 HOH
6.849
OD1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00408-f1 1 O00408 100.0 0.0 ASP A:270 A:270 124.0 0.827 T -59.0 -36.3