Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 12301975 . T A CCDS8647.1:NM_002336.2:c.3107aAt>aTt_NP_002327.2:p.1036N>I Homo sapiens LDL receptor related protein 6 (LRP6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3s2k 1 O75581 99.84 0.0 X-RAY
 2011-11-02 ASN A:409 A:1036 22.0 0.138 56.0 54.5 22.0 0.138 0.0 NAG
HOH
 7.721
3.318
 N
ND2
 C8
O
ASN B:409 B:1036 22.0 0.138 49.4 54.7 22.0 0.138 0.0 NAG
 7.628
 N
 C8
5fww 1 O75581 99.84 0.0 X-RAY
 2016-07-20 ASN A:409 A:1036 22.0 0.138 T 59.3 63.4 22.0 0.138 0.0
4a0p 1 O75581 100.0 0.0 X-RAY
 2011-10-26 ASN A:411 A:1036 25.0 0.156 T 58.4 49.7 25.0 0.156 0.0 NAG
HOH
 7.470
2.572
 N
O
 O7
O
5gje 2 O75581 99.84 0.0 EM
 2017-01-18 ASN B:406 B:1036 22.0 0.138 49.5 54.8 22.0 0.138 0.0 NAG
 7.629
 N
 C8
6h16 1 O75581 100.0 0.0 X-RAY
 2019-01-30 ASN A:407 A:1036 35.0 0.219 T 51.1 69.5 35.0 0.219 0.0 NAG
 7.399
 N
 C8
6h15 1 O75581 100.0 0.0 X-RAY
 2019-01-30 ASN A:407 A:1036 27.0 0.169 T 60.0 58.7 27.0 0.169 0.0 NAG
HOH
 7.410
2.861
 N
ND2
 O7
O
ASN D:407 B:1036 22.0 0.138 T 58.2 55.9 22.0 0.138 0.0 NAG
HOH
 7.506
4.432
 N
ND2
 C8
O
3s8v 1 O75581 99.84 0.0 X-RAY
 2011-10-26 ASN A:416 A:1036 26.0 0.163 T 42.6 55.0 26.0 0.163 0.0
ASN B:416 B:1036 23.0 0.144 44.1 62.9 NA NA NA
3s8z 1 O75581 99.84 0.0 X-RAY
 2011-10-26 ASN A:416 A:1036 19.0 0.119 T 53.2 67.8 19.0 0.119 0.0 NAG
 7.011
 N
 O7

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75581-f1 1 O75581 100.0 0.0 ASN A:1036 A:1036 23.0 0.144 57.6 46.1