Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 12301987 . C A CCDS8647.1:NM_002336.2:c.3095tGt>tTt_NP_002327.2:p.1032C>F Homo sapiens LDL receptor related protein 6 (LRP6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3s2k 1 O75581 99.84 0.0 X-RAY
 2011-11-02 CYS A:405 A:1032 1.0 0.007 E -108.3 127.4 1.0 0.007 0.0 NAG
HOH
 6.471
7.480
 CB
O
 N2
O
CYS B:405 B:1032 0.0 0.0 E -108.7 122.7 0.0 0.0 0.0 NAG
 6.344
 CB
 N2
5fww 1 O75581 99.84 0.0 X-RAY
 2016-07-20 CYS A:405 A:1032 0.0 0.0 E -102.8 125.1 0.0 0.0 0.0
4a0p 1 O75581 100.0 0.0 X-RAY
 2011-10-26 CYS A:407 A:1032 1.0 0.007 E -112.9 120.0 1.0 0.007 0.0 NAG
HOH
 6.008
6.219
 CB
O
 O7
O
5gje 2 O75581 99.84 0.0 EM
 2017-01-18 CYS B:402 B:1032 1.0 0.007 E -108.8 122.7 1.0 0.007 0.0 NAG
 6.343
 CB
 N2
6h16 1 O75581 100.0 0.0 X-RAY
 2019-01-30 CYS A:403 A:1032 0.0 0.0 E -106.4 133.3 0.0 0.0 0.0 NAG
 5.723
 SG
 O7
6h15 1 O75581 100.0 0.0 X-RAY
 2019-01-30 CYS A:403 A:1032 1.0 0.007 E -103.1 117.3 1.0 0.007 0.0 NAG
HOH
 5.398
6.909
 SG
O
 O7
O
CYS D:403 B:1032 3.0 0.022 E -107.9 115.4 3.0 0.022 0.0 NAG
HOH
 5.654
9.464
 SG
C
 O7
O
3s8v 1 O75581 99.84 0.0 X-RAY
 2011-10-26 CYS A:412 A:1032 0.0 0.0 E -101.2 118.4 0.0 0.0 0.0
CYS B:412 B:1032 1.0 0.007 E -99.3 118.6 NA NA NA
3s8z 1 O75581 99.84 0.0 X-RAY
 2011-10-26 CYS A:412 A:1032 2.0 0.015 E -105.2 128.4 2.0 0.015 0.0 NAG
NAG
 4.974
8.811
 SG
SG
 O7
O6

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75581-f1 1 O75581 100.0 0.0 CYS A:1032 A:1032 0.0 0.0 E -101.6 120.1