Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 13769572 . T A CCDS8662.1:NM_000834.3:c.1145aAg>aTg_NP_000825.2:p.382K>M Homo sapiens glutamate ionotropic receptor NMDA type subunit 2B (GRIN2B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7eu8 2 Q13224 100.0 0.0 EM
 2021-07-28 LYS B:382 B:382 66.0 NA G 54.6 42.5 66.0 NA NA
LYS D:382 D:382 76.0 NA T 56.4 39.0 76.0 NA NA
6wi1 2 ? 99.28 0.0 EM
 2020-07-15 LYS B:413 B:382 61.0 NA T 57.5 29.1 61.0 NA NA
LYS D:413 D:382 61.0 NA T 57.5 29.1 61.0 NA NA
5fxg 2 Q00960 98.91 0.0 EM
 2016-05-11 LYS B:357 B:382 120.0 NA S 62.3 32.3 120.0 NA NA
LYS D:357 D:382 116.0 NA S 62.3 32.4 116.0 NA NA
5fxh 2 Q00960 98.91 0.0 EM
 2016-05-11 LYS B:357 B:382 99.0 NA T -61.8 -38.5 99.0 NA NA
LYS D:357 D:382 96.0 NA T -61.7 -38.6 96.0 NA NA
5fxi 2 Q00960 98.91 0.0 EM
 2016-05-11 LYS B:357 B:382 101.0 NA T 52.5 37.3 101.0 NA NA
LYS D:357 D:382 103.0 NA T 52.4 37.3 103.0 NA NA
5fxj 2 Q00960 98.91 0.0 EM
 2016-05-25 LYS B:357 B:382 61.0 NA S 58.9 23.1 61.0 NA NA
LYS D:357 D:382 62.0 NA S 58.8 23.0 62.0 NA NA
5fxk 2 Q00960 98.91 0.0 EM
 2016-05-11 LYS B:357 B:382 94.0 NA T -65.1 -34.3 94.0 NA NA
LYS D:357 D:382 91.0 NA T -65.1 -34.4 91.0 NA NA
6whr 2 Q00960 98.91 0.0 EM
 2020-08-05 LYS B:413 B:382 87.0 NA T 54.0 22.0 87.0 NA NA
LYS D:413 D:382 87.0 NA T 54.0 21.9 87.0 NA NA
6whs 2 Q00960 98.91 0.0 EM
 2020-08-05 LYS B:413 B:382 82.0 NA T 54.0 20.5 82.0 NA NA
LYS D:413 D:382 80.0 NA T 53.9 20.4 80.0 NA NA
6wht 2 Q00960 98.91 0.0 EM
 2020-08-05 LYS B:413 B:382 76.0 NA T 65.8 -2.9 76.0 NA NA
LYS D:413 D:382 74.0 NA T 65.8 -3.0 74.0 NA NA
6whu 2 Q00960 98.91 0.0 EM
 2020-08-05 LYS B:413 B:382 81.0 NA S 55.7 26.8 81.0 NA NA
LYS D:413 D:382 81.0 NA S 55.8 26.7 81.0 NA NA
6whv 2 Q00960 98.91 0.0 EM
 2020-08-05 LYS B:413 B:382 81.0 NA T 59.0 47.3 81.0 NA NA
LYS D:413 D:382 65.0 NA T 56.9 36.1 65.0 NA NA
6whw 2 ? 98.91 0.0 EM
 2020-07-15 LYS B:413 B:382 79.0 NA T 52.6 45.5 79.0 NA NA
LYS D:413 D:382 80.0 NA T 52.5 45.6 80.0 NA NA
6whx 2 ? 98.91 0.0 EM
 2020-07-15 LYS B:413 B:382 128.0 0.64 T 54.5 40.1 128.0 0.64 0.0
LYS D:413 D:382 77.0 NA S 57.3 64.9 77.0 NA NA
6why 2 ? 98.91 0.0 EM
 2020-07-15 LYS B:413 B:382 66.0 NA S 56.5 48.4 66.0 NA NA
LYS D:413 D:382 68.0 NA S 56.5 48.4 68.0 NA NA
6wi0 2 Q00960 98.91 0.0 EM
 2020-07-15 LYS B:413 B:382 78.0 NA T 56.1 26.9 78.0 NA NA
LYS D:413 D:382 76.0 NA T 56.1 26.9 76.0 NA NA
4pe5 2 Q00960 97.82 0.0 X-RAY
 2014-06-04 LYS B:356 B:382 85.0 NA T 57.4 27.7 85.0 NA NA
LYS D:356 D:382 86.0 NA T -138.1 12.2 86.0 NA NA
6cna 2 Q00960 99.14 0.0 EM
 2018-10-03 LYS B:349 B:382 57.0 NA T 53.4 48.2 57.0 NA NA
LYS D:349 D:382 56.0 NA T 53.5 48.1 56.0 NA NA
5uow 3 A7XY94 86.86 0.0 EM
 2017-03-22 ARG D:377 D:377 93.0 NA T -66.1 -41.0 93.0 NA NA
5up2 3 A7XY94 86.86 0.0 EM
 2017-03-22 ARG D:377 D:377 99.0 NA T -66.1 -41.0 99.0 NA NA
5iou 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG C:377 B:377 100.0 NA T -129.1 -31.6 100.0 NA NA
ARG D:377 D:377 99.0 NA T -111.0 -21.2 99.0 NA NA
5iov 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG C:377 B:377 88.0 NA S -124.6 -81.9 88.0 NA NA
ARG D:377 D:377 97.0 NA S -149.0 -42.5 97.0 NA NA
5ipq 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG B:377 B:377 92.0 NA T -77.0 -34.1 92.0 NA NA
ARG D:377 D:377 92.0 NA T -77.1 -34.8 92.0 NA NA
5ipr 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG B:377 B:377 94.0 NA T -77.0 -34.2 94.0 NA NA
ARG D:377 D:377 93.0 NA T -77.1 -34.8 93.0 NA NA
5ips 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG B:377 B:377 95.0 NA T -77.1 -34.1 95.0 NA NA
ARG D:377 D:377 95.0 NA T -77.0 -34.9 95.0 NA NA
5ipt 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG B:377 B:377 95.0 NA T -77.0 -34.1 95.0 NA NA
ARG D:377 D:377 93.0 NA T -77.1 -34.8 93.0 NA NA
5ipu 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG B:377 B:377 93.0 NA T -77.0 -34.2 93.0 NA NA
ARG D:377 D:377 93.0 NA T -77.1 -34.8 93.0 NA NA
5ipv 2 A7XY94 85.78 0.0 EM
 2016-04-20 ARG B:377 B:377 92.0 NA T -77.1 -34.9 92.0 NA NA
ARG D:377 D:377 93.0 NA T -77.0 -34.9 93.0 NA NA
4tll 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 ARG B:358 B:377 75.0 NA S -109.6 -64.5 75.0 NA NA
ARG D:358 D:377 91.0 NA S -108.2 -64.8 91.0 NA NA
4tlm 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 ARG B:358 B:377 100.0 NA T -77.0 -34.2 100.0 NA NA
ARG D:358 D:377 99.0 NA T -77.1 -34.8 99.0 NA NA
5ewj 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 LYS B:352 B:382 168.0 0.84 S 51.8 22.3 168.0 0.84 0.0 HOH
 4.741
 N
 O
LYS D:352 D:382 125.0 0.625 S 169.0 26.4 NA NA NA
5ewl 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 LYS B:352 B:382 186.0 0.93 S 62.4 -14.1 186.0 0.93 0.0 HOH
 7.744
 O
 O
LYS D:352 D:382 154.0 0.77 S 49.5 16.0 NA NA NA
5ewm 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 LYS B:352 B:382 166.0 0.83 S 51.9 14.9 166.0 0.83 0.0 HOH
 6.577
 CE
 O
LYS D:352 D:382 124.0 0.62 S 173.1 18.6 NA NA NA
3qel 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 LYS B:352 B:382 84.0 NA S 52.6 12.8 84.0 NA NA HOH
 9.904
 N
 O
LYS D:352 NA:NA DO NA DO DO DO NA NA NA
3qem 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 LYS B:352 B:382 79.0 NA S -138.2 24.5 79.0 NA NA
LYS D:352 D:382 115.0 NA 360.0 12.1 NA NA NA
5b3j 2 Q00960 99.45 0.0 X-RAY
 2016-05-11 LYS C:352 C:382 73.0 NA T -124.9 26.2 73.0 NA NA HOH
 9.253
 CB
 O
LYS E:352 NA:NA DO NA DO DO DO NA NA NA
3jpw 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 LYS A:351 A:382 75.0 NA S 57.8 7.8 75.0 NA NA
3jpy 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 LYS A:351 A:382 77.0 NA S 63.5 0.7 77.0 NA NA ZN
ZN
 5.584
9.946
 N
O
 ZN
ZN
6e7r 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 LYS B:351 B:382 83.0 NA T 41.6 37.8 83.0 NA NA HOH
 2.521
 N
 O
LYS D:351 D:382 83.0 NA T 39.9 33.5 NA NA NA
6e7s 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 LYS B:351 B:382 82.0 NA T 68.1 -2.6 82.0 NA NA
LYS D:351 D:382 84.0 NA T 63.2 0.6 NA NA NA
6e7t 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 LYS B:351 B:382 85.0 NA S 41.6 26.1 85.0 NA NA
LYS D:351 D:382 82.0 NA S 41.7 24.1 NA NA NA
6e7u 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 LYS B:351 B:382 78.0 NA T 57.4 20.6 78.0 NA NA HOH
 3.814
 N
 O
LYS D:351 D:382 80.0 NA T 58.5 16.4 NA NA NA
6e7v 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 LYS B:351 B:382 83.0 NA T 43.1 35.2 83.0 NA NA HOH
 4.015
 N
 O
LYS D:351 D:382 83.0 NA T 42.6 33.9 NA NA NA
6e7w 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 LYS B:351 B:382 78.0 NA T 60.9 9.3 78.0 NA NA
LYS D:351 D:382 78.0 NA T 61.8 8.4 NA NA NA
6e7x 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 LYS B:351 B:382 85.0 NA T 37.8 35.0 85.0 NA NA
LYS D:351 D:382 83.0 NA T 36.3 34.8 NA NA NA
5tpz 2 Q00960 99.45 0.0 X-RAY
 2016-12-14 LYS B:351 D:382 78.0 NA S -142.7 -71.6 78.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13224-f1 1 Q13224 100.0 0.0 LYS A:382 A:382 179.0 0.895 T 65.4 13.8