Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 13828725 . G A CCDS8662.1:NM_000834.3:c.1079cCg>cTg_NP_000825.2:p.360P>L Homo sapiens glutamate ionotropic receptor NMDA type subunit 2B (GRIN2B), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7eu8 2 Q13224 100.0 0.0 EM
 2021-07-28 PRO B:360 B:360 22.0 0.152 -67.2 147.9 22.0 0.152 0.0
PRO D:360 D:360 6.0 0.041 -78.3 162.2 6.0 0.041 0.0
6wi1 2 ? 99.28 0.0 EM
 2020-07-15 PRO B:391 B:360 9.0 0.062 -87.6 -176.2 9.0 0.062 0.0 NAG
 9.703
 N
 O5
PRO D:391 D:360 9.0 0.062 -87.6 -176.2 9.0 0.062 0.0 NAG
 9.702
 N
 O5
5fxg 2 Q00960 98.91 0.0 EM
 2016-05-11 PRO B:335 B:360 15.0 NA -73.4 144.8 15.0 NA NA
PRO D:335 D:360 14.0 NA -73.4 144.7 14.0 NA NA
5fxh 2 Q00960 98.91 0.0 EM
 2016-05-11 PRO B:335 B:360 29.0 NA -76.6 155.5 29.0 NA NA
PRO D:335 D:360 31.0 NA -76.6 155.5 31.0 NA NA
5fxi 2 Q00960 98.91 0.0 EM
 2016-05-11 PRO B:335 B:360 23.0 NA -72.3 176.2 23.0 NA NA
PRO D:335 D:360 23.0 NA -72.3 176.2 23.0 NA NA
5fxj 2 Q00960 98.91 0.0 EM
 2016-05-25 PRO B:335 B:360 18.0 NA -78.7 159.3 18.0 NA NA
PRO D:335 D:360 17.0 NA -78.7 159.3 17.0 NA NA
5fxk 2 Q00960 98.91 0.0 EM
 2016-05-11 PRO B:335 B:360 19.0 NA -66.9 142.4 19.0 NA NA
PRO D:335 D:360 20.0 NA -66.8 142.3 20.0 NA NA
6whr 2 Q00960 98.91 0.0 EM
 2020-08-05 PRO B:391 B:360 16.0 0.11 -64.4 168.2 16.0 0.11 0.0
PRO D:391 D:360 17.0 0.117 -64.4 168.2 17.0 0.117 0.0
6whs 2 Q00960 98.91 0.0 EM
 2020-08-05 PRO B:391 B:360 31.0 0.214 -95.9 155.3 31.0 0.214 0.0
PRO D:391 D:360 33.0 0.228 -96.0 155.4 33.0 0.228 0.0
6wht 2 Q00960 98.91 0.0 EM
 2020-08-05 PRO B:391 B:360 8.0 0.055 -76.2 175.5 8.0 0.055 0.0
PRO D:391 D:360 6.0 0.041 -76.2 175.6 6.0 0.041 0.0
6whu 2 Q00960 98.91 0.0 EM
 2020-08-05 PRO B:391 B:360 2.0 0.014 -88.7 130.4 2.0 0.014 0.0
PRO D:391 D:360 2.0 0.014 -88.7 130.4 2.0 0.014 0.0
6whv 2 Q00960 98.91 0.0 EM
 2020-08-05 PRO B:391 B:360 16.0 0.11 -82.8 142.6 16.0 0.11 0.0
PRO D:391 D:360 11.0 0.076 -83.9 145.3 11.0 0.076 0.0
6whw 2 ? 98.91 0.0 EM
 2020-07-15 PRO B:391 B:360 4.0 0.028 -88.7 128.2 4.0 0.028 0.0
PRO D:391 D:360 3.0 0.021 -88.7 128.2 3.0 0.021 0.0
6whx 2 ? 98.91 0.0 EM
 2020-07-15 PRO B:391 B:360 10.0 0.069 -80.3 134.2 10.0 0.069 0.0
PRO D:391 D:360 4.0 0.028 -82.3 156.3 4.0 0.028 0.0
6why 2 ? 98.91 0.0 EM
 2020-07-15 PRO B:391 B:360 14.0 0.097 -67.0 165.6 14.0 0.097 0.0
PRO D:391 D:360 14.0 0.097 -67.0 165.6 14.0 0.097 0.0
6wi0 2 Q00960 98.91 0.0 EM
 2020-07-15 PRO B:391 B:360 13.0 0.09 -89.8 129.0 13.0 0.09 0.0
PRO D:391 D:360 12.0 0.083 -89.7 129.0 12.0 0.083 0.0
4pe5 2 Q00960 97.82 0.0 X-RAY
 2014-06-04 PRO B:334 B:360 19.0 0.131 -86.6 146.8 19.0 0.131 0.0
PRO D:334 D:360 5.0 0.034 -73.2 142.1 5.0 0.034 0.0
6cna 2 Q00960 99.14 0.0 EM
 2018-10-03 PRO B:327 B:360 28.0 0.193 -69.4 154.7 28.0 0.193 0.0
PRO D:327 D:360 26.0 0.179 -69.4 154.7 26.0 0.179 0.0
5uow 3 A7XY94 86.86 0.0 EM
 2017-03-22 PRO D:355 D:355 59.0 0.407 -71.2 142.7 59.0 0.407 0.0
5up2 3 A7XY94 86.86 0.0 EM
 2017-03-22 PRO D:355 D:355 52.0 0.359 -106.9 126.3 52.0 0.359 0.0
5iou 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO C:355 B:355 41.0 NA -78.3 148.9 41.0 NA NA
PRO D:355 D:355 37.0 NA -77.2 140.0 37.0 NA NA
5iov 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO C:355 B:355 29.0 NA -83.5 157.7 29.0 NA NA
PRO D:355 D:355 36.0 NA -81.0 151.9 36.0 NA NA
5ipq 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO B:355 B:355 60.0 NA -64.2 153.7 60.0 NA NA
PRO D:355 D:355 63.0 NA -63.6 153.7 63.0 NA NA
5ipr 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO B:355 B:355 61.0 NA -64.2 153.6 61.0 NA NA
PRO D:355 D:355 63.0 NA -63.5 153.8 63.0 NA NA
5ips 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO B:355 B:355 59.0 NA -64.3 153.6 59.0 NA NA
PRO D:355 D:355 64.0 NA -63.7 153.8 64.0 NA NA
5ipt 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO B:355 B:355 61.0 NA -64.2 153.6 61.0 NA NA
PRO D:355 D:355 62.0 NA -63.6 153.8 62.0 NA NA
5ipu 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO B:355 B:355 60.0 NA -64.2 153.6 60.0 NA NA
PRO D:355 D:355 62.0 NA -63.5 153.8 62.0 NA NA
5ipv 2 A7XY94 85.78 0.0 EM
 2016-04-20 PRO B:355 B:355 36.0 NA -44.1 159.3 36.0 NA NA
PRO D:355 D:355 40.0 NA -43.9 150.7 40.0 NA NA
4tll 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 PRO B:336 B:355 6.0 0.041 -79.3 154.6 6.0 0.041 0.0
PRO D:336 D:355 37.0 0.255 -79.7 153.3 37.0 0.255 0.0
4tlm 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 PRO B:336 B:355 31.0 0.214 -64.2 153.6 31.0 0.214 0.0
PRO D:336 D:355 48.0 0.331 -63.5 153.9 48.0 0.331 0.0
5ewj 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 PRO B:330 B:360 5.0 0.034 -81.9 154.2 5.0 0.034 0.0 HOH
 3.175
 O
 O
PRO D:330 D:360 7.0 0.048 -86.4 145.7 NA NA NA
5ewl 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 PRO B:330 B:360 3.0 0.021 -96.8 141.2 3.0 0.021 0.0
PRO D:330 D:360 7.0 0.048 -88.0 156.3 NA NA NA
5ewm 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 PRO B:330 B:360 6.0 0.041 -81.2 153.9 6.0 0.041 0.0 HOH
 4.285
 CA
 O
PRO D:330 D:360 10.0 0.069 -79.1 150.5 NA NA NA
3qel 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 PRO B:330 B:360 3.0 0.021 -73.2 141.9 3.0 0.021 0.0 HOH
 4.054
 CD
 O
PRO D:330 D:360 9.0 0.062 -87.7 147.2 9.0 0.062 0.0
3qem 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 PRO B:330 B:360 2.0 0.014 -87.7 158.4 2.0 0.014 0.0
PRO D:330 D:360 7.0 0.048 -84.0 154.3 NA NA NA
5b3j 2 Q00960 99.45 0.0 X-RAY
 2016-05-11 PRO C:330 C:360 4.0 0.028 -79.2 146.5 4.0 0.028 0.0 HOH
 9.286
 CD
 O
PRO E:330 D:360 4.0 0.028 -79.5 148.3 NA NA NA
3jpw 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 PRO A:329 A:360 4.0 0.028 -87.3 150.6 4.0 0.028 0.0 CL
CL
CL
NA
HOH
 9.740
8.882
8.346
7.464
4.429
 CG
CB
C
CG
CD
 CL
CL
CL
NA
O
3jpy 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 PRO A:329 A:360 7.0 0.048 -94.8 147.8 7.0 0.048 0.0 CL
NA
ZN
 9.612
7.539
6.088
 CG
CB
CD
 CL
NA
ZN
6e7r 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 PRO B:329 B:360 8.0 0.055 -71.6 138.3 8.0 0.055 0.0 CL
HOH
 9.999
4.103
 CG
CD
 CL
O
PRO D:329 D:360 8.0 0.055 -73.7 137.3 NA NA NA
6e7s 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 PRO B:329 B:360 6.0 0.041 -78.9 139.7 6.0 0.041 0.0 HOH
 4.008
 CG
 O
PRO D:329 D:360 6.0 0.041 -80.7 137.8 NA NA NA
6e7t 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 PRO B:329 B:360 3.0 0.021 -74.2 131.2 3.0 0.021 0.0 HOH
 4.040
 CD
 O
PRO D:329 D:360 4.0 0.028 -72.5 136.0 NA NA NA
6e7u 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 PRO B:329 B:360 8.0 0.055 -75.8 144.3 8.0 0.055 0.0 HOH
 3.830
 O
 O
PRO D:329 D:360 7.0 0.048 -75.9 142.3 NA NA NA
6e7v 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 PRO B:329 B:360 8.0 0.055 -84.7 135.0 8.0 0.055 0.0 CL
HOH
 9.968
3.948
 CG
O
 CL
O
PRO D:329 D:360 11.0 0.076 -81.5 137.1 NA NA NA
6e7w 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 PRO B:329 B:360 8.0 0.055 -75.8 138.0 8.0 0.055 0.0 HOH
 4.270
 CD
 O
PRO D:329 D:360 10.0 0.069 -71.7 139.3 NA NA NA
6e7x 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 PRO B:329 B:360 9.0 0.062 -78.4 139.0 9.0 0.062 0.0 HOH
 4.108
 CD
 O
PRO D:329 D:360 13.0 0.09 -76.0 139.1 NA NA NA
5tpz 2 Q00960 99.45 0.0 X-RAY
 2016-12-14 PRO B:329 D:360 25.0 0.172 -86.5 179.1 25.0 0.172 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13224-f1 1 Q13224 100.0 0.0 PRO A:360 A:360 12.0 0.083 -68.7 146.2