Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 13906449 . G A CCDS8662.1:NM_000834.3:c.812gCg>gTg_NP_000825.2:p.271A>V Homo sapiens glutamate ionotropic receptor NMDA type subunit 2B (GRIN2B), mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7eu8 2 Q13224 100.0 0.0 EM
 2021-07-28 ALA B:271 B:271 103.0 0.896 T -64.6 -39.2 103.0 0.896 0.0
ALA D:271 D:271 105.0 0.913 T -75.7 -10.5 105.0 0.913 0.0
6wi1 2 ? 99.28 0.0 EM
 2020-07-15 SER B:302 B:271 71.0 0.617 S -76.5 -176.5 71.0 0.617 0.0
SER D:302 D:271 71.0 0.617 S -76.5 -176.5 71.0 0.617 0.0
5fxg 2 Q00960 98.91 0.0 EM
 2016-05-11 SER B:246 B:271 100.0 NA T -72.8 -20.8 100.0 NA NA
SER D:246 D:271 103.0 NA T -72.8 -20.8 103.0 NA NA
5fxh 2 Q00960 98.91 0.0 EM
 2016-05-11 SER B:246 B:271 108.0 NA T -64.8 -35.4 108.0 NA NA
SER D:246 D:271 112.0 NA T -64.7 -35.4 112.0 NA NA
5fxi 2 Q00960 98.91 0.0 EM
 2016-05-11 SER B:246 B:271 107.0 NA S -69.7 -15.4 107.0 NA NA
SER D:246 D:271 109.0 NA S -69.6 -15.4 109.0 NA NA
5fxj 2 Q00960 98.91 0.0 EM
 2016-05-25 SER B:246 B:271 99.0 NA S -71.3 -53.1 99.0 NA NA
SER D:246 D:271 103.0 NA S -71.3 -53.1 103.0 NA NA
5fxk 2 Q00960 98.91 0.0 EM
 2016-05-11 SER B:246 B:271 113.0 NA T -63.8 -14.7 113.0 NA NA
SER D:246 D:271 113.0 NA T -63.8 -14.7 113.0 NA NA
6whr 2 Q00960 98.91 0.0 EM
 2020-08-05 SER B:302 B:271 102.0 0.887 T -56.2 -36.7 102.0 0.887 0.0
SER D:302 D:271 102.0 0.887 T -56.2 -36.7 102.0 0.887 0.0
6whs 2 Q00960 98.91 0.0 EM
 2020-08-05 SER B:302 B:271 100.0 0.87 T -72.8 -13.3 100.0 0.87 0.0
SER D:302 D:271 96.0 0.835 T -72.8 -13.4 96.0 0.835 0.0
6wht 2 Q00960 98.91 0.0 EM
 2020-08-05 SER B:302 B:271 112.0 0.974 T -78.1 -12.4 112.0 0.974 0.0
SER D:302 D:271 111.0 0.965 T -78.1 -12.5 111.0 0.965 0.0
6whu 2 Q00960 98.91 0.0 EM
 2020-08-05 SER B:302 B:271 96.0 0.835 S -75.1 -54.7 96.0 0.835 0.0
SER D:302 D:271 96.0 0.835 S -75.0 -54.6 96.0 0.835 0.0
6whv 2 Q00960 98.91 0.0 EM
 2020-08-05 SER B:302 B:271 97.0 0.843 T -66.1 -14.0 97.0 0.843 0.0
SER D:302 D:271 117.0 1.0 S -64.8 -15.0 117.0 1.0 0.0
6whw 2 ? 98.91 0.0 EM
 2020-07-15 SER B:302 B:271 100.0 0.87 S -86.1 -16.3 100.0 0.87 0.0
SER D:302 D:271 102.0 0.887 S -86.2 -16.3 102.0 0.887 0.0
6whx 2 ? 98.91 0.0 EM
 2020-07-15 SER B:302 B:271 65.0 0.565 S -97.3 171.7 65.0 0.565 0.0
SER D:302 D:271 126.0 1.0 T -53.0 -25.9 126.0 1.0 0.0
6why 2 ? 98.91 0.0 EM
 2020-07-15 SER B:302 B:271 111.0 0.965 T -72.3 -15.9 111.0 0.965 0.0
SER D:302 D:271 112.0 0.974 T -72.2 -15.9 112.0 0.974 0.0
6wi0 2 Q00960 98.91 0.0 EM
 2020-07-15 SER B:302 B:271 80.0 0.696 T -68.7 -59.2 80.0 0.696 0.0
SER D:302 D:271 78.0 0.678 T -68.6 -59.2 78.0 0.678 0.0
4pe5 2 Q00960 97.82 0.0 X-RAY
 2014-06-04 SER B:245 B:271 108.0 0.939 T -68.6 -24.2 108.0 0.939 0.0
SER D:245 D:271 91.0 0.791 T -68.9 -24.1 91.0 0.791 0.0
6cna 2 Q00960 99.14 0.0 EM
 2018-10-03 SER B:238 B:271 93.0 0.809 T -59.7 -39.2 93.0 0.809 0.0
SER D:238 D:271 94.0 0.817 T -59.6 -39.3 94.0 0.817 0.0
5uow 3 A7XY94 86.86 0.0 EM
 2017-03-22 ASP D:266 D:266 104.0 0.693 T -82.6 4.7 104.0 0.693 0.0
5up2 3 A7XY94 86.86 0.0 EM
 2017-03-22 ASP D:266 D:266 106.0 0.707 T -82.5 4.6 106.0 0.707 0.0
5iou 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP C:266 B:266 101.0 NA S -104.4 -28.4 101.0 NA NA
ASP D:266 D:266 99.0 NA S -103.4 -28.6 99.0 NA NA
5iov 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP C:266 B:266 94.0 NA S -156.9 -29.7 94.0 NA NA
ASP D:266 D:266 101.0 NA S -99.8 -29.6 101.0 NA NA
5ipq 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP B:266 B:266 78.0 NA T -82.7 4.7 78.0 NA NA
ASP D:266 D:266 78.0 NA T -82.6 4.7 78.0 NA NA
5ipr 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP B:266 B:266 76.0 NA T -82.7 4.7 76.0 NA NA
ASP D:266 D:266 76.0 NA T -82.6 4.7 76.0 NA NA
5ips 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP B:266 B:266 78.0 NA T -82.6 4.6 78.0 NA NA
ASP D:266 D:266 78.0 NA T -82.6 4.6 78.0 NA NA
5ipt 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP B:266 B:266 74.0 NA T -82.7 4.6 74.0 NA NA
ASP D:266 D:266 77.0 NA T -82.6 4.6 77.0 NA NA
5ipu 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP B:266 B:266 77.0 NA T -82.7 4.7 77.0 NA NA
ASP D:266 D:266 75.0 NA T -82.6 4.6 75.0 NA NA
5ipv 2 A7XY94 85.78 0.0 EM
 2016-04-20 ASP B:266 B:266 77.0 NA T -82.6 4.6 77.0 NA NA
ASP D:266 D:266 75.0 NA T -82.6 4.8 75.0 NA NA
4tll 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 ASP B:247 B:266 138.0 0.92 T -74.2 -16.6 138.0 0.92 0.0
ASP D:247 D:266 97.0 NA T -73.4 -14.6 97.0 NA NA
4tlm 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 ASP B:247 B:266 108.0 0.72 T -82.7 4.7 108.0 0.72 0.0
ASP D:247 D:266 110.0 0.733 T -82.5 4.7 110.0 0.733 0.0
5ewj 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 ALA B:241 B:271 78.0 0.678 T -51.5 -32.3 78.0 0.678 0.0 HOH
 3.110
 N
 O
ALA D:241 D:271 78.0 0.678 T -50.9 -32.7 NA NA NA
5ewl 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 ALA B:241 B:271 80.0 0.696 T -55.7 -33.1 80.0 0.696 0.0 HOH
 2.790
 N
 O
ALA D:241 D:271 81.0 0.704 T -56.3 -32.4 NA NA NA
5ewm 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 ALA B:241 B:271 81.0 0.704 T -48.3 -34.2 81.0 0.704 0.0 HOH
 8.337
 N
 O
ALA D:241 D:271 82.0 0.713 T -48.9 -34.4 NA NA NA
3qel 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 SER B:241 B:271 94.0 0.817 T -68.9 -23.7 94.0 0.817 0.0 HOH
 3.336
 N
 O
SER D:241 D:271 97.0 0.843 T -61.6 -22.2 97.0 0.843 0.0 HOH
 8.296
 N
 O
3qem 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 SER B:241 B:271 96.0 0.835 T -62.6 -23.5 96.0 0.835 0.0
SER D:241 D:271 100.0 0.87 T -48.1 -19.7 NA NA NA
5b3j 2 Q00960 99.45 0.0 X-RAY
 2016-05-11 SER C:241 C:271 169.0 1.0 360.0 -57.1 169.0 1.0 0.0
SER E:241 NA:NA DO NA DO DO DO NA NA NA
3jpw 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 SER A:240 A:271 104.0 0.904 T -49.0 -24.2 104.0 0.904 0.0 CL
HOH
 4.745
8.314
 O
N
 CL
O
3jpy 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 SER A:240 A:271 102.0 0.887 T -63.3 -35.3 102.0 0.887 0.0
6e7r 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 SER B:240 B:271 96.0 0.835 T -65.9 -19.1 96.0 0.835 0.0 HOH
 3.740
 CA
 O
SER D:240 D:271 100.0 0.87 T -59.1 -20.4 NA NA NA
6e7s 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 SER B:240 B:271 100.0 0.87 T -67.5 -12.8 100.0 0.87 0.0 HOH
 7.186
 N
 O
SER D:240 D:271 104.0 0.904 T -66.4 -8.6 NA NA NA
6e7t 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 SER B:240 B:271 93.0 0.809 T -67.6 -23.4 93.0 0.809 0.0 HOH
 3.590
 CA
 O
SER D:240 D:271 96.0 0.835 T -60.2 -21.6 NA NA NA
6e7u 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 SER B:240 B:271 98.0 0.852 T -76.1 -9.3 98.0 0.852 0.0 HOH
 3.592
 CA
 O
SER D:240 D:271 98.0 0.852 T -62.0 -22.4 NA NA NA
6e7v 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 SER B:240 B:271 99.0 0.861 T -81.7 -11.8 99.0 0.861 0.0 HOH
 4.034
 CA
 O
SER D:240 D:271 101.0 0.878 T -65.1 -17.5 NA NA NA
6e7w 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 SER B:240 B:271 93.0 0.809 T -71.3 -19.7 93.0 0.809 0.0 HOH
 6.977
 N
 O
SER D:240 D:271 100.0 0.87 T -60.5 -18.0 NA NA NA
6e7x 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 SER B:240 B:271 93.0 0.809 T -62.6 -21.3 93.0 0.809 0.0 HOH
 3.842
 CA
 O
SER D:240 D:271 99.0 0.861 T -60.8 -18.0 NA NA NA
5tpz 2 Q00960 99.45 0.0 X-RAY
 2016-12-14 SER B:240 D:271 98.0 NA S -51.0 -51.7 98.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13224-f1 1 Q13224 100.0 0.0 ALA A:271 A:271 56.0 0.487 T -79.1 -15.1