Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 13906612 . G A CCDS8662.1:NM_000834.3:c.649Cag>Tag_NP_000825.2:p.217Q>* Homo sapiens glutamate ionotropic receptor NMDA type subunit 2B (GRIN2B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7eu8 2 Q13224 100.0 0.0 EM
 2021-07-28 GLN B:217 B:217 25.0 NA H -63.5 -42.5 8.0 NA NA D:Q13224:NA
GLN D:217 D:217 33.0 NA H -64.5 -41.3 15.0 NA NA B:Q13224:NA
6wi1 2 ? 99.28 0.0 EM
 2020-07-15 GLN B:248 B:217 1.0 NA H -80.7 -32.4 1.0 NA NA
GLN D:248 D:217 1.0 NA H -80.7 -32.3 1.0 NA NA
5fxg 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:192 B:217 64.0 NA H -69.6 -41.4 31.0 NA NA D:Q00960:NA
GLN D:192 D:217 64.0 NA H -69.7 -41.3 31.0 NA NA B:Q00960:NA
5fxh 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:192 B:217 46.0 NA H -63.5 -33.3 46.0 NA NA
GLN D:192 D:217 48.0 NA H -63.5 -33.4 48.0 NA NA
5fxi 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:192 B:217 24.0 NA H -71.7 -53.2 24.0 NA NA
GLN D:192 D:217 23.0 NA H -71.7 -53.2 23.0 NA NA
5fxj 2 Q00960 98.91 0.0 EM
 2016-05-25 GLN B:192 B:217 21.0 NA H -68.0 -54.7 21.0 NA NA
GLN D:192 D:217 19.0 NA H -68.1 -54.7 19.0 NA NA
5fxk 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:192 B:217 38.0 NA H -68.8 -31.8 38.0 NA NA
GLN D:192 D:217 36.0 NA H -68.8 -31.8 36.0 NA NA
6whr 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:248 B:217 88.0 0.489 H -53.3 -34.0 44.0 0.244 0.245 D:Q00960:0.244
GLN D:248 D:217 89.0 0.494 H -53.4 -33.9 46.0 0.256 0.238 B:Q00960:0.239
6whs 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:248 B:217 36.0 NA H -56.6 -21.5 36.0 NA NA
GLN D:248 D:217 35.0 NA H -56.5 -21.5 35.0 NA NA
6wht 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:248 B:217 30.0 NA H -63.5 -49.7 11.0 NA NA D:Q00960:NA
GLN D:248 D:217 28.0 NA H -63.4 -49.7 11.0 NA NA B:Q00960:NA
6whu 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:248 B:217 24.0 NA H -66.4 -22.2 24.0 NA NA
GLN D:248 D:217 23.0 NA H -66.4 -22.2 23.0 NA NA
6whv 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:248 B:217 36.0 NA T -67.6 -2.0 36.0 NA NA
GLN D:248 D:217 90.0 0.5 H -59.0 -34.8 28.0 0.156 0.344 B:Q00960:0.344
6whw 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:248 B:217 69.0 0.383 H -52.1 -46.8 30.0 0.167 0.216 D:None:0.217
GLN D:248 D:217 70.0 0.389 H -52.2 -46.9 30.0 0.167 0.222 B:None:0.222
6whx 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:248 B:217 107.0 0.594 H -50.1 -27.5 36.0 0.2 0.394 D:None:0.394
GLN D:248 D:217 87.0 0.483 H -55.7 -42.4 47.0 0.261 0.222 B:None:0.222
6why 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:248 B:217 68.0 NA H -69.1 -41.4 59.0 NA NA D:None:NA
GLN D:248 D:217 69.0 NA H -69.2 -41.4 58.0 NA NA B:None:NA
6wi0 2 Q00960 98.91 0.0 EM
 2020-07-15 GLN B:248 B:217 74.0 0.411 H -61.6 -64.0 74.0 0.411 0.0
GLN D:248 D:217 74.0 0.411 H -61.6 -64.0 74.0 0.411 0.0
4pe5 2 Q00960 97.82 0.0 X-RAY
 2014-06-04 GLN B:191 B:217 88.0 0.489 H -57.5 -42.4 45.0 0.25 0.239 D:Q00960:0.239
GLN D:191 D:217 78.0 0.433 H -52.9 -46.0 40.0 0.222 0.211 B:Q00960:0.211
6cna 2 Q00960 99.14 0.0 EM
 2018-10-03 GLN B:184 B:217 65.0 0.361 H -53.9 -38.9 59.0 0.328 0.033 D:Q00960:0.033
GLN D:184 D:217 67.0 0.372 H -53.8 -39.0 59.0 0.328 0.044 B:Q00960:0.044
5uow 3 A7XY94 86.86 0.0 EM
 2017-03-22 GLN D:212 D:212 50.0 NA H -63.4 -43.9 50.0 NA NA
5up2 3 A7XY94 86.86 0.0 EM
 2017-03-22 GLN D:212 D:212 49.0 NA H -63.4 -43.9 49.0 NA NA
5iou 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN C:212 B:212 54.0 NA H -65.8 -35.5 37.0 NA NA D:A7XY94:NA
GLN D:212 D:212 56.0 NA H -65.6 -36.5 53.0 NA NA C:A7XY94:NA
5iov 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN C:212 B:212 61.0 NA H -65.7 -35.5 61.0 NA NA
GLN D:212 D:212 64.0 NA H -66.1 -35.9 64.0 NA NA
5ipq 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:212 B:212 45.0 NA H -63.8 -40.8 45.0 NA NA
GLN D:212 D:212 39.0 NA H -64.2 -40.3 39.0 NA NA
5ipr 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:212 B:212 44.0 NA H -63.8 -40.8 44.0 NA NA
GLN D:212 D:212 40.0 NA H -64.3 -40.2 40.0 NA NA
5ips 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:212 B:212 46.0 NA H -63.8 -40.8 46.0 NA NA
GLN D:212 D:212 40.0 NA H -64.2 -40.4 40.0 NA NA
5ipt 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:212 B:212 44.0 NA H -63.9 -40.7 44.0 NA NA
GLN D:212 D:212 40.0 NA H -64.3 -40.3 40.0 NA NA
5ipu 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:212 B:212 43.0 NA H -63.9 -40.7 43.0 NA NA
GLN D:212 D:212 40.0 NA H -64.2 -40.3 40.0 NA NA
5ipv 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:212 B:212 39.0 NA H -64.4 -40.2 39.0 NA NA
GLN D:212 D:212 41.0 NA H -64.3 -40.3 38.0 NA NA B:A7XY94:NA
4tll 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 GLN B:193 B:212 87.0 0.483 H -58.8 -50.6 25.0 0.139 0.344 D:A7XY94:0.344
GLN D:193 D:212 74.0 0.411 H -58.9 -48.9 27.0 0.15 0.261 B:A7XY94:0.261
4tlm 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 GLN B:193 B:212 86.0 0.478 H -63.8 -40.8 16.0 0.089 0.389 D:A7XY94:0.389
GLN D:193 D:212 27.0 NA H -64.3 -40.3 11.0 NA NA B:A7XY94:NA
5ewj 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:187 B:217 73.0 0.406 H -57.4 -43.6 73.0 0.406 0.0 HOH
 6.966
 C
 O
GLN D:187 D:217 58.0 0.322 H -57.1 -43.8 NA NA NA
5ewl 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:187 B:217 74.0 0.411 H -56.1 -43.8 74.0 0.411 0.0 HOH
 7.434
 NE2
 O
GLN D:187 D:217 58.0 0.322 H -56.0 -44.3 NA NA NA
5ewm 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:187 B:217 77.0 0.428 H -56.0 -48.2 77.0 0.428 0.0 HOH
 9.267
 OE1
 O
GLN D:187 D:217 59.0 0.328 H -55.9 -48.4 NA NA NA
3qel 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 GLN B:187 B:217 79.0 0.439 H -52.8 -45.6 79.0 0.439 0.0 HOH
 7.542
 N
 O
GLN D:187 D:217 87.0 0.483 H -47.8 -42.0 87.0 0.483 0.0
3qem 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 GLN B:187 B:217 74.0 0.411 H -44.8 -48.4 74.0 0.411 0.0
GLN D:187 D:217 86.0 0.478 H -50.5 -62.6 NA NA NA
5b3j 2 Q00960 99.45 0.0 X-RAY
 2016-05-11 GLN C:187 NA:NA DO NA DO DO DO NA NA NA
GLN E:187 D:217 151.0 NA 360.0 95.6 NA NA NA
3jpw 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 GLN A:186 A:217 88.0 0.489 H -42.0 -47.0 88.0 0.489 0.0 CL
 7.654
 N
 CL
3jpy 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 GLN A:186 A:217 40.0 NA H -38.9 -58.5 40.0 NA NA
6e7r 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:186 B:217 73.0 0.406 H -54.4 -44.8 73.0 0.406 0.0 HOH
 7.607
 N
 O
GLN D:186 D:217 58.0 0.322 H -52.0 -46.0 NA NA NA
6e7s 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:186 B:217 65.0 0.361 H -59.9 -40.3 65.0 0.361 0.0 HOH
 7.366
 N
 O
GLN D:186 D:217 70.0 0.389 H -64.5 -39.5 NA NA NA
6e7t 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:186 B:217 78.0 0.433 H -59.6 -44.3 78.0 0.433 0.0 HOH
 7.469
 N
 O
GLN D:186 D:217 78.0 0.433 H -58.9 -44.1 NA NA NA
6e7u 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:186 B:217 69.0 0.383 H -57.8 -50.3 69.0 0.383 0.0 HOH
 7.787
 N
 O
GLN D:186 D:217 53.0 0.294 H -59.0 -50.8 NA NA NA
6e7v 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:186 B:217 73.0 0.406 H -61.0 -42.6 73.0 0.406 0.0 HOH
 7.537
 N
 O
GLN D:186 D:217 55.0 0.306 H -58.7 -43.6 NA NA NA
6e7w 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:186 B:217 61.0 0.339 H -60.9 -40.2 61.0 0.339 0.0 HOH
 7.442
 N
 O
GLN D:186 D:217 69.0 0.383 H -66.0 -39.3 NA NA NA
6e7x 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:186 B:217 66.0 0.367 H -57.9 -47.1 66.0 0.367 0.0 HOH
 7.517
 N
 O
GLN D:186 D:217 73.0 0.406 H -48.9 -48.5 NA NA NA
5tpz 2 Q00960 99.45 0.0 X-RAY
 2016-12-14 GLN B:186 D:217 47.0 NA H -50.9 -50.1 47.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13224-f1 1 Q13224 100.0 0.0 GLN A:217 A:217 55.0 0.306 H -59.4 -37.6