Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 13906723 . G A CCDS8662.1:NM_000834.3:c.538Cag>Tag_NP_000825.2:p.180Q>* Homo sapiens glutamate ionotropic receptor NMDA type subunit 2B (GRIN2B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7eu8 2 Q13224 100.0 0.0 EM
 2021-07-28 GLN B:180 B:180 81.0 NA H -64.0 -40.9 81.0 NA NA
GLN D:180 D:180 88.0 NA H -64.5 -42.9 88.0 NA NA
6wi1 2 ? 99.28 0.0 EM
 2020-07-15 GLN B:211 B:180 124.0 0.689 H -56.5 -25.6 82.0 0.456 0.233 A:None:0.233
GLN D:211 D:180 121.0 0.672 H -56.4 -25.7 76.0 0.422 0.25 C:None:0.25
5fxg 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:155 B:180 83.0 NA H -59.0 -21.7 83.0 NA NA
GLN D:155 D:180 81.0 NA H -59.0 -21.7 81.0 NA NA
5fxh 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:155 B:180 84.0 NA H -57.5 -23.4 84.0 NA NA
GLN D:155 D:180 81.0 NA H -57.6 -23.3 81.0 NA NA
5fxi 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:155 B:180 78.0 NA H -67.3 -22.8 78.0 NA NA
GLN D:155 D:180 79.0 NA H -67.3 -22.8 79.0 NA NA
5fxj 2 Q00960 98.91 0.0 EM
 2016-05-25 GLN B:155 B:180 80.0 NA H -61.1 -35.0 80.0 NA NA
GLN D:155 D:180 81.0 NA H -61.1 -35.0 81.0 NA NA
5fxk 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:155 B:180 80.0 NA H -59.0 -32.9 80.0 NA NA
GLN D:155 D:180 81.0 NA H -59.1 -32.9 81.0 NA NA
6whr 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:211 B:180 84.0 0.467 H -65.7 -12.5 84.0 0.467 0.0
GLN D:211 D:180 81.0 0.45 H -65.6 -12.5 81.0 0.45 0.0
6whs 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:211 B:180 109.0 0.606 H -60.6 -43.9 109.0 0.606 0.0
GLN D:211 D:180 108.0 0.6 H -60.6 -43.9 108.0 0.6 0.0
6wht 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:211 B:180 63.0 NA H -54.4 -46.3 63.0 NA NA
GLN D:211 D:180 63.0 NA H -54.3 -46.3 63.0 NA NA
6whu 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:211 B:180 113.0 0.628 H -80.0 -24.6 110.0 0.611 0.017 A:P35439:0.017
GLN D:211 D:180 114.0 0.633 H -80.0 -24.6 109.0 0.606 0.027 C:P35439:0.028
6whv 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:211 B:180 92.0 0.511 H -59.5 -41.8 92.0 0.511 0.0
GLN D:211 D:180 87.0 0.483 H -54.0 -46.8 55.0 0.306 0.177 C:P35439:0.178
6whw 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:211 B:180 119.0 0.661 H -56.0 -43.4 89.0 0.494 0.167 A:None:0.167
GLN D:211 D:180 119.0 0.661 H -56.0 -43.5 86.0 0.478 0.183 C:None:0.183
6whx 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:211 B:180 164.0 0.911 T -67.5 -4.0 124.0 0.689 0.222 A:None:0.222
GLN D:211 D:180 160.0 0.889 H -66.6 -1.4 101.0 0.561 0.328 C:None:0.328
6why 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:211 B:180 37.0 NA H -61.2 -40.3 37.0 NA NA
GLN D:211 D:180 37.0 NA H -61.2 -40.3 37.0 NA NA
6wi0 2 Q00960 98.91 0.0 EM
 2020-07-15 GLN B:211 B:180 110.0 0.611 H -63.0 -39.8 110.0 0.611 0.0
GLN D:211 D:180 107.0 0.594 H -63.0 -39.8 107.0 0.594 0.0
4pe5 2 Q00960 97.82 0.0 X-RAY
 2014-06-04 GLN B:154 B:180 38.0 NA H -63.5 -48.5 38.0 NA NA
GLN D:154 D:180 109.0 0.606 H -73.0 -44.7 100.0 0.556 0.05 C:P35439:0.05
6cna 2 Q00960 99.14 0.0 EM
 2018-10-03 GLN B:147 B:180 39.0 NA H -63.1 -61.2 39.0 NA NA
GLN D:147 D:180 39.0 NA H -63.1 -61.2 39.0 NA NA
5uow 3 A7XY94 86.86 0.0 EM
 2017-03-22 GLN D:175 D:175 56.0 NA H -64.4 -44.6 56.0 NA NA
5up2 3 A7XY94 86.86 0.0 EM
 2017-03-22 GLN D:175 D:175 57.0 NA H -64.4 -44.6 57.0 NA NA
5iou 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN C:175 B:175 85.0 NA H -63.0 -46.6 85.0 NA NA
GLN D:175 D:175 84.0 NA H -62.9 -51.3 84.0 NA NA
5iov 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN C:175 B:175 85.0 NA H -62.8 -48.9 85.0 NA NA
GLN D:175 D:175 85.0 NA H -62.8 -49.0 85.0 NA NA
5ipq 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:175 B:175 62.0 NA T 68.6 -21.5 62.0 NA NA
GLN D:175 D:175 61.0 NA T 68.7 -21.6 61.0 NA NA
5ipr 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:175 B:175 62.0 NA T 68.6 -21.4 62.0 NA NA
GLN D:175 D:175 62.0 NA T 68.7 -21.6 62.0 NA NA
5ips 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:175 B:175 67.0 NA T 63.9 -6.6 67.0 NA NA
GLN D:175 D:175 68.0 NA T 60.6 -0.9 68.0 NA NA
5ipt 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:175 B:175 67.0 NA T 63.9 -6.7 67.0 NA NA
GLN D:175 D:175 67.0 NA T 58.2 5.1 67.0 NA NA
5ipu 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:175 B:175 67.0 NA T 62.0 -0.7 67.0 NA NA
GLN D:175 D:175 69.0 NA T 55.9 11.1 69.0 NA NA
5ipv 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:175 B:175 69.0 NA T 57.9 5.3 69.0 NA NA
GLN D:175 D:175 70.0 NA T 55.8 11.1 70.0 NA NA
4tll 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 GLN B:156 B:175 81.0 0.45 H -70.4 -45.2 81.0 0.45 0.0
GLN D:156 D:175 81.0 0.45 H -67.8 -42.8 81.0 0.45 0.0
4tlm 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 GLN B:156 B:175 28.0 NA T 68.6 -21.4 28.0 NA NA
GLN D:156 D:175 35.0 NA T 68.7 -21.6 35.0 NA NA
5ewj 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:150 B:180 116.0 0.644 H -67.1 -45.7 109.0 0.606 0.038 A:Q91977:0.039
 HOH
 3.331
 N
 O
GLN D:150 D:180 113.0 0.628 H -66.9 -46.1 NA NA NA
5ewl 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:150 B:180 92.0 0.511 H -68.4 -40.8 92.0 0.511 0.0 HOH
 3.005
 N
 O
GLN D:150 D:180 110.0 0.611 H -68.9 -40.9 NA NA NA
5ewm 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:150 B:180 113.0 0.628 H -59.4 -40.9 102.0 0.567 0.061 A:Q91977:0.061
 HOH
 3.094
 N
 O
GLN D:150 D:180 113.0 0.628 H -59.3 -40.9 NA NA NA
3qel 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 GLN B:150 B:180 108.0 0.6 H -73.2 -44.4 100.0 0.556 0.044 A:Q91977:0.044
 HOH
 6.769
 N
 O
GLN D:150 D:180 108.0 0.6 H -72.5 -37.8 108.0 0.6 0.0 HOH
 3.380
 N
 O
3qem 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 GLN B:150 B:180 111.0 0.617 H -75.6 -42.4 99.0 0.55 0.067 A:Q91977:0.067
GLN D:150 D:180 44.0 NA H -79.2 -29.3 NA NA NA
5b3j 2 Q00960 99.45 0.0 X-RAY
 2016-05-11 GLN C:150 C:180 53.0 NA H -68.3 -44.3 53.0 NA NA
GLN E:150 D:180 122.0 0.678 H -73.3 -34.7 NA NA NA
3jpw 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 GLN A:149 A:180 108.0 0.6 H -68.1 -41.4 108.0 0.6 0.0 CL
CL
CL
HOH
 3.355
2.985
8.606
4.563
 N
CG
C
O
 CL
CL
CL
O
3jpy 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 GLN A:149 A:180 48.0 NA H -60.9 -46.5 48.0 NA NA CL
 3.246
 CB
 CL
6e7r 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:149 B:180 115.0 0.639 H -70.3 -43.9 109.0 0.606 0.033 A:A0A1L8F5J9:0.033
 HOH
 3.083
 N
 O
GLN D:149 D:180 109.0 0.606 H -71.9 -40.9 NA NA NA
6e7s 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:149 B:180 115.0 0.639 H -72.8 -43.7 103.0 0.572 0.067 A:A0A1L8F5J9:0.067
 HOH
 3.816
 NE2
 O
GLN D:149 D:180 113.0 0.628 H -74.3 -45.9 NA NA NA
6e7t 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:149 B:180 113.0 0.628 H -69.0 -44.0 103.0 0.572 0.056 A:A0A1L8F5J9:0.056
 HOH
 3.020
 NE2
 O
GLN D:149 D:180 113.0 0.628 H -74.9 -40.5 NA NA NA
6e7u 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:149 B:180 117.0 0.65 H -77.6 -44.1 108.0 0.6 0.05 A:A0A1L8F5J9:0.05
 HOH
 3.027
 N
 O
GLN D:149 D:180 109.0 0.606 H -79.4 -42.6 NA NA NA
6e7v 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:149 B:180 116.0 0.644 H -71.8 -43.6 104.0 0.578 0.066 A:A0A1L8F5J9:0.067
 HOH
 3.302
 N
 O
GLN D:149 D:180 114.0 0.633 H -72.7 -43.5 NA NA NA
6e7w 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:149 B:180 115.0 0.639 H -72.9 -46.6 105.0 0.583 0.056 A:A0A1L8F5J9:0.056
 HOH
 3.088
 N
 O
GLN D:149 D:180 117.0 0.65 H -69.9 -49.8 NA NA NA
6e7x 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:149 B:180 112.0 0.622 H -68.0 -46.2 100.0 0.556 0.066 A:A0A1L8F5J9:0.067
 HOH
 3.424
 N
 O
GLN D:149 D:180 117.0 0.65 H -69.1 -42.5 NA NA NA
5tpz 2 Q00960 99.45 0.0 X-RAY
 2016-12-14 GLN B:149 D:180 41.0 NA H -60.6 -50.9 41.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13224-f1 1 Q13224 100.0 0.0 GLN A:180 A:180 107.0 0.594 H -68.0 -44.1