Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 13906807 . G A CCDS8662.1:NM_000834.3:c.454Cag>Tag_NP_000825.2:p.152Q>* Homo sapiens glutamate ionotropic receptor NMDA type subunit 2B (GRIN2B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7eu8 2 Q13224 100.0 0.0 EM
 2021-07-28 GLN B:152 B:152 28.0 NA H -64.5 -41.5 28.0 NA NA
GLN D:152 D:152 10.0 NA H -63.2 -41.3 10.0 NA NA
6wi1 2 ? 99.28 0.0 EM
 2020-07-15 GLN B:183 B:152 36.0 0.2 H -65.7 -39.6 36.0 0.2 0.0 NAG
 9.696
 NE2
 O6
GLN D:183 D:152 34.0 0.189 H -65.7 -39.6 34.0 0.189 0.0 NAG
 9.696
 NE2
 O6
5fxg 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:127 B:152 45.0 NA H -55.4 -34.7 45.0 NA NA
GLN D:127 D:152 47.0 NA H -55.4 -34.7 47.0 NA NA
5fxh 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:127 B:152 54.0 NA H -58.2 -37.7 54.0 NA NA
GLN D:127 D:152 53.0 NA H -58.2 -37.7 53.0 NA NA
5fxi 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:127 B:152 40.0 NA H -54.8 -34.6 40.0 NA NA
GLN D:127 D:152 40.0 NA H -54.9 -34.6 40.0 NA NA
5fxj 2 Q00960 98.91 0.0 EM
 2016-05-25 GLN B:127 B:152 47.0 NA H -55.3 -36.8 47.0 NA NA
GLN D:127 D:152 49.0 NA H -55.3 -36.8 49.0 NA NA
5fxk 2 Q00960 98.91 0.0 EM
 2016-05-11 GLN B:127 B:152 45.0 NA H -52.5 -34.9 45.0 NA NA
GLN D:127 D:152 45.0 NA H -52.6 -34.9 45.0 NA NA
6whr 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:183 B:152 33.0 0.183 H -60.4 -31.3 33.0 0.183 0.0
GLN D:183 D:152 34.0 0.189 H -60.4 -31.3 34.0 0.189 0.0
6whs 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:183 B:152 53.0 0.294 H -53.5 -44.1 53.0 0.294 0.0
GLN D:183 D:152 53.0 0.294 H -53.5 -44.1 53.0 0.294 0.0
6wht 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:183 B:152 34.0 0.189 H -58.6 -42.9 34.0 0.189 0.0
GLN D:183 D:152 34.0 0.189 H -58.7 -42.9 34.0 0.189 0.0
6whu 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:183 B:152 32.0 0.178 H -59.5 -41.1 32.0 0.178 0.0
GLN D:183 D:152 33.0 0.183 H -59.5 -41.1 33.0 0.183 0.0
6whv 2 Q00960 98.91 0.0 EM
 2020-08-05 GLN B:183 B:152 40.0 0.222 H -67.3 -36.2 40.0 0.222 0.0
GLN D:183 D:152 28.0 0.156 H -63.4 -40.8 28.0 0.156 0.0
6whw 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:183 B:152 33.0 0.183 H -61.9 -35.0 33.0 0.183 0.0
GLN D:183 D:152 32.0 0.178 H -61.8 -35.2 32.0 0.178 0.0
6whx 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:183 B:152 34.0 0.189 H -70.5 -35.9 34.0 0.189 0.0
GLN D:183 D:152 44.0 0.244 H -65.6 -41.3 44.0 0.244 0.0
6why 2 ? 98.91 0.0 EM
 2020-07-15 GLN B:183 B:152 54.0 0.3 H -62.5 -52.6 54.0 0.3 0.0
GLN D:183 D:152 52.0 0.289 H -62.5 -52.6 52.0 0.289 0.0
6wi0 2 Q00960 98.91 0.0 EM
 2020-07-15 GLN B:183 B:152 42.0 0.233 H -63.9 -33.5 42.0 0.233 0.0
GLN D:183 D:152 43.0 0.239 H -63.9 -33.5 43.0 0.239 0.0
4pe5 2 Q00960 97.82 0.0 X-RAY
 2014-06-04 GLN B:126 B:152 35.0 0.194 H -66.5 -43.5 35.0 0.194 0.0
GLN D:126 D:152 33.0 0.183 H -75.0 -43.6 33.0 0.183 0.0
6cna 2 Q00960 99.14 0.0 EM
 2018-10-03 GLN B:119 B:152 59.0 0.328 H -73.4 -11.5 59.0 0.328 0.0
GLN D:119 D:152 58.0 0.322 H -73.4 -11.5 58.0 0.322 0.0
5uow 3 A7XY94 86.86 0.0 EM
 2017-03-22 GLN D:147 D:147 46.0 NA H -58.1 -46.2 46.0 NA NA
5up2 3 A7XY94 86.86 0.0 EM
 2017-03-22 GLN D:147 D:147 41.0 NA H -58.1 -46.2 41.0 NA NA
5iou 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN C:147 B:147 53.0 NA H -73.6 -47.1 53.0 NA NA
GLN D:147 D:147 54.0 NA H -73.0 -44.4 54.0 NA NA
5iov 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN C:147 B:147 45.0 NA H -78.0 -46.5 45.0 NA NA
GLN D:147 D:147 54.0 NA H -74.9 -46.5 54.0 NA NA
5ipq 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:147 B:147 56.0 NA H -58.3 -46.5 56.0 NA NA
GLN D:147 D:147 56.0 NA H -58.1 -46.3 56.0 NA NA
5ipr 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:147 B:147 55.0 NA H -58.2 -46.5 55.0 NA NA
GLN D:147 D:147 57.0 NA H -58.0 -46.3 57.0 NA NA
5ips 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:147 B:147 54.0 NA H -58.3 -46.4 54.0 NA NA
GLN D:147 D:147 57.0 NA H -58.1 -46.2 57.0 NA NA
5ipt 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:147 B:147 56.0 NA H -58.3 -46.4 56.0 NA NA
GLN D:147 D:147 57.0 NA H -58.1 -46.3 57.0 NA NA
5ipu 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:147 B:147 56.0 NA H -58.2 -46.4 56.0 NA NA
GLN D:147 D:147 57.0 NA H -58.1 -46.2 57.0 NA NA
5ipv 2 A7XY94 85.78 0.0 EM
 2016-04-20 GLN B:147 B:147 61.0 NA H -58.2 -46.2 61.0 NA NA
GLN D:147 D:147 61.0 NA H -58.3 -46.1 61.0 NA NA
4tll 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 GLN B:128 B:147 34.0 0.189 H -69.0 -28.3 34.0 0.189 0.0
GLN D:128 D:147 46.0 NA H -68.8 -29.8 46.0 NA NA
4tlm 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 GLN B:128 B:147 34.0 NA H -58.3 -46.4 34.0 NA NA
GLN D:128 D:147 40.0 NA H -58.1 -46.2 40.0 NA NA
5ewj 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:122 B:152 31.0 0.172 H -70.8 -41.1 31.0 0.172 0.0 HOH
 3.857
 OE1
 O
GLN D:122 D:152 25.0 0.139 H -71.3 -40.5 NA NA NA
5ewl 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:122 B:152 36.0 0.2 H -64.2 -49.5 36.0 0.2 0.0
GLN D:122 D:152 36.0 0.2 H -63.7 -50.1 NA NA NA
5ewm 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 GLN B:122 B:152 44.0 0.244 H -64.1 -41.4 44.0 0.244 0.0 HOH
 3.801
 N
 O
GLN D:122 D:152 35.0 0.194 H -62.7 -42.1 NA NA NA
3qel 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 GLN B:122 B:152 44.0 0.244 H -74.7 -43.2 44.0 0.244 0.0 HOH
 2.851
 NE2
 O
GLN D:122 D:152 39.0 0.217 H -73.9 -36.2 39.0 0.217 0.0
3qem 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 GLN B:122 B:152 36.0 0.2 H -82.0 -45.9 36.0 0.2 0.0
GLN D:122 D:152 44.0 0.244 H -84.5 -38.6 NA NA NA
5b3j 2 Q00960 99.45 0.0 X-RAY
 2016-05-11 GLN C:122 C:152 34.0 0.189 H -64.2 -45.9 34.0 0.189 0.0 HOH
 4.900
 CG
 O
GLN E:122 D:152 35.0 0.194 H -64.5 -47.5 NA NA NA
3jpw 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 GLN A:121 A:152 36.0 0.2 H -57.1 -35.8 36.0 0.2 0.0 CL
CL
NA
HOH
 9.646
5.419
9.497
2.374
 C
N
NE2
NE2
 CL
CL
NA
O
3jpy 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 GLN A:121 A:152 31.0 NA H -52.2 -47.8 31.0 NA NA CL
NA
ZN
 9.555
9.633
8.725
 C
CB
CB
 CL
NA
ZN
6e7r 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:121 B:152 40.0 0.222 H -67.8 -38.7 40.0 0.222 0.0 HOH
 2.791
 OE1
 O
GLN D:121 D:152 47.0 0.261 H -67.4 -46.1 NA NA NA
6e7s 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:121 B:152 41.0 0.228 H -79.2 -37.7 41.0 0.228 0.0 HOH
 2.445
 OE1
 O
GLN D:121 D:152 41.0 0.228 H -74.7 -40.8 NA NA NA
6e7t 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:121 B:152 44.0 0.244 H -74.5 -38.8 44.0 0.244 0.0 CL
HOH
 9.842
2.628
 C
OE1
 CL
O
GLN D:121 D:152 44.0 0.244 H -77.8 -37.7 NA NA NA
6e7u 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:121 B:152 45.0 0.25 H -67.6 -39.9 45.0 0.25 0.0 CL
HOH
 9.799
3.597
 C
OE1
 CL
O
GLN D:121 D:152 42.0 0.233 H -64.4 -42.4 NA NA NA
6e7v 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:121 B:152 42.0 0.233 H -68.5 -41.7 42.0 0.233 0.0 CL
HOH
 9.847
2.712
 C
OE1
 CL
O
GLN D:121 D:152 55.0 0.306 H -68.5 -42.7 NA NA NA
6e7w 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:121 B:152 39.0 0.217 H -73.9 -39.3 39.0 0.217 0.0 CL
HOH
 9.581
2.545
 C
OE1
 CL
O
GLN D:121 D:152 42.0 0.233 H -74.4 -41.2 NA NA NA
6e7x 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 GLN B:121 B:152 44.0 0.244 H -67.6 -43.8 44.0 0.244 0.0 CL
HOH
 9.710
2.620
 C
OE1
 CL
O
GLN D:121 D:152 53.0 0.294 H -62.5 -51.7 NA NA NA
5tpz 2 Q00960 99.45 0.0 X-RAY
 2016-12-14 GLN B:121 D:152 49.0 0.272 H -56.7 -59.4 49.0 0.272 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13224-f1 1 Q13224 100.0 0.0 GLN A:152 A:152 38.0 0.211 H -66.5 -43.5