Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 13906812 . A C CCDS8662.1:NM_000834.3:c.449aTt>aGt_NP_000825.2:p.150I>S Homo sapiens glutamate ionotropic receptor NMDA type subunit 2B (GRIN2B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7eu8 2 Q13224 100.0 0.0 EM
 2021-07-28 ILE B:150 B:150 49.0 NA H -65.2 -41.7 49.0 NA NA
ILE D:150 D:150 41.0 0.234 H -64.9 -42.6 41.0 0.234 0.0
6wi1 2 ? 99.28 0.0 EM
 2020-07-15 ILE B:181 B:150 36.0 0.206 S -86.5 -52.7 36.0 0.206 0.0
ILE D:181 D:150 39.0 0.223 S -86.5 -52.7 39.0 0.223 0.0
5fxg 2 Q00960 98.91 0.0 EM
 2016-05-11 ILE B:125 B:150 87.0 NA H -51.8 -35.6 87.0 NA NA
ILE D:125 D:150 88.0 NA H -51.7 -35.7 88.0 NA NA
5fxh 2 Q00960 98.91 0.0 EM
 2016-05-11 ILE B:125 B:150 63.0 NA H -54.9 -25.4 63.0 NA NA
ILE D:125 D:150 64.0 NA H -54.9 -25.4 64.0 NA NA
5fxi 2 Q00960 98.91 0.0 EM
 2016-05-11 ILE B:125 B:150 68.0 NA H -54.4 -35.5 68.0 NA NA
ILE D:125 D:150 69.0 NA H -54.5 -35.5 69.0 NA NA
5fxj 2 Q00960 98.91 0.0 EM
 2016-05-25 ILE B:125 B:150 63.0 NA H -52.9 -55.2 63.0 NA NA
ILE D:125 D:150 66.0 NA H -52.9 -55.2 66.0 NA NA
5fxk 2 Q00960 98.91 0.0 EM
 2016-05-11 ILE B:125 B:150 83.0 NA H -54.6 -37.1 83.0 NA NA
ILE D:125 D:150 83.0 NA H -54.6 -37.2 83.0 NA NA
6whr 2 Q00960 98.91 0.0 EM
 2020-08-05 ILE B:181 B:150 46.0 0.263 H -70.8 -41.2 46.0 0.263 0.0
ILE D:181 D:150 48.0 0.274 H -70.9 -41.1 48.0 0.274 0.0
6whs 2 Q00960 98.91 0.0 EM
 2020-08-05 ILE B:181 B:150 36.0 0.206 H -86.8 -37.3 36.0 0.206 0.0
ILE D:181 D:150 38.0 0.217 H -86.8 -37.2 38.0 0.217 0.0
6wht 2 Q00960 98.91 0.0 EM
 2020-08-05 ILE B:181 B:150 73.0 0.417 H -46.7 -43.4 73.0 0.417 0.0
ILE D:181 D:150 76.0 0.434 H -46.7 -43.4 76.0 0.434 0.0
6whu 2 Q00960 98.91 0.0 EM
 2020-08-05 ILE B:181 B:150 37.0 0.211 H -55.8 -42.2 37.0 0.211 0.0
ILE D:181 D:150 35.0 0.2 H -55.8 -42.3 35.0 0.2 0.0
6whv 2 Q00960 98.91 0.0 EM
 2020-08-05 ILE B:181 B:150 42.0 0.24 H -57.8 -31.9 42.0 0.24 0.0
ILE D:181 D:150 33.0 0.189 H -46.2 -36.3 33.0 0.189 0.0
6whw 2 ? 98.91 0.0 EM
 2020-07-15 ILE B:181 B:150 32.0 0.183 H -71.2 -28.1 32.0 0.183 0.0
ILE D:181 D:150 31.0 0.177 H -71.2 -28.1 31.0 0.177 0.0
6whx 2 ? 98.91 0.0 EM
 2020-07-15 ILE B:181 B:150 27.0 0.154 T -53.7 -30.7 27.0 0.154 0.0
ILE D:181 D:150 48.0 0.274 T -62.8 -17.7 48.0 0.274 0.0
6why 2 ? 98.91 0.0 EM
 2020-07-15 ILE B:181 B:150 34.0 0.194 H -55.9 -48.9 34.0 0.194 0.0
ILE D:181 D:150 33.0 0.189 H -56.0 -48.9 33.0 0.189 0.0
6wi0 2 Q00960 98.91 0.0 EM
 2020-07-15 ILE B:181 B:150 13.0 0.074 H -46.0 -50.2 13.0 0.074 0.0
ILE D:181 D:150 15.0 0.086 H -46.1 -50.2 15.0 0.086 0.0
4pe5 2 Q00960 97.82 0.0 X-RAY
 2014-06-04 ILE B:124 B:150 8.0 0.046 H -60.4 -41.4 8.0 0.046 0.0
ILE D:124 D:150 10.0 0.057 H -54.5 -42.4 10.0 0.057 0.0
6cna 2 Q00960 99.14 0.0 EM
 2018-10-03 ILE B:117 B:150 39.0 0.223 H -47.8 -55.4 39.0 0.223 0.0
ILE D:117 D:150 38.0 0.217 H -47.8 -55.5 38.0 0.217 0.0
5uow 3 A7XY94 86.86 0.0 EM
 2017-03-22 ILE D:145 D:145 62.0 0.354 H -59.0 -45.4 62.0 0.354 0.0
5up2 3 A7XY94 86.86 0.0 EM
 2017-03-22 ILE D:145 D:145 23.0 0.131 H -59.0 -45.4 23.0 0.131 0.0
5iou 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE C:145 B:145 62.0 NA H -74.9 -15.4 62.0 NA NA
ILE D:145 D:145 71.0 NA H -70.5 -23.9 71.0 NA NA
5iov 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE C:145 B:145 56.0 NA H -74.7 -16.7 56.0 NA NA
ILE D:145 D:145 55.0 NA H -73.1 -18.2 55.0 NA NA
5ipq 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE B:145 B:145 66.0 NA H -59.1 -45.6 66.0 NA NA
ILE D:145 D:145 70.0 NA H -58.9 -45.4 70.0 NA NA
5ipr 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE B:145 B:145 67.0 NA H -59.1 -45.6 67.0 NA NA
ILE D:145 D:145 70.0 NA H -58.9 -45.4 70.0 NA NA
5ips 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE B:145 B:145 66.0 NA H -59.1 -45.6 66.0 NA NA
ILE D:145 D:145 71.0 NA H -58.9 -45.4 71.0 NA NA
5ipt 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE B:145 B:145 66.0 NA H -59.1 -45.6 66.0 NA NA
ILE D:145 D:145 71.0 NA H -59.0 -45.4 71.0 NA NA
5ipu 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE B:145 B:145 66.0 NA H -59.1 -45.6 66.0 NA NA
ILE D:145 D:145 71.0 NA H -59.0 -45.4 71.0 NA NA
5ipv 2 A7XY94 85.78 0.0 EM
 2016-04-20 ILE B:145 B:145 62.0 NA S -104.7 -45.5 62.0 NA NA
ILE D:145 D:145 62.0 NA S -104.8 -45.3 62.0 NA NA
4tll 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 ILE B:126 B:145 3.0 0.017 H -56.6 -36.3 3.0 0.017 0.0
ILE D:126 D:145 7.0 NA H -57.0 -36.7 7.0 NA NA
4tlm 2 A7XY94 87.47 0.0 X-RAY
 2014-07-02 ILE B:126 B:145 9.0 0.051 H -59.1 -45.6 9.0 0.051 0.0
ILE D:126 D:145 34.0 0.194 H -59.1 -45.3 34.0 0.194 0.0
5ewj 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 ILE B:120 B:150 11.0 0.063 H -58.7 -46.2 11.0 0.063 0.0 HOH
 4.162
 CD1
 O
ILE D:120 D:150 10.0 0.057 H -55.1 -45.3 NA NA NA
5ewl 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 ILE B:120 B:150 15.0 0.086 H -63.3 -57.3 15.0 0.086 0.0 HOH
 6.826
 CD1
 O
ILE D:120 D:150 8.0 0.046 H -64.5 -54.1 NA NA NA
5ewm 2 Q13224 99.73 0.0 X-RAY
 2016-03-02 ILE B:120 B:150 8.0 0.046 H -61.7 -44.8 8.0 0.046 0.0 5SM
HOH
 8.416
3.179
 CD1
N
 N1
O
ILE D:120 D:150 9.0 0.051 H -62.0 -44.3 NA NA NA
3qel 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 ILE B:120 B:150 9.0 0.051 H -54.3 -41.8 9.0 0.051 0.0 HOH
 3.254
 N
 O
ILE D:120 D:150 11.0 0.063 H -47.9 -35.8 11.0 0.063 0.0 HOH
 4.866
 CD1
 O
3qem 2 Q00960 99.45 0.0 X-RAY
 2011-06-15 ILE B:120 B:150 12.0 0.069 H -33.6 -44.2 12.0 0.069 0.0
ILE D:120 D:150 14.0 NA T -71.0 -26.9 NA NA NA
5b3j 2 Q00960 99.45 0.0 X-RAY
 2016-05-11 ILE C:120 C:150 28.0 NA H -62.3 -37.7 28.0 NA NA HOH
 8.112
 C
 O
ILE E:120 D:150 28.0 NA H -62.8 -38.3 NA NA NA
3jpw 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 ILE A:119 A:150 4.0 0.023 H -65.2 -38.2 4.0 0.023 0.0 CL
CL
CL
NA
HOH
 7.099
7.033
3.562
7.874
4.694
 CG1
CD1
N
N
CD1
 CL
CL
CL
NA
O
3jpy 1 Q00960 99.45 0.0 X-RAY
 2009-12-08 ILE A:119 A:150 10.0 NA H -55.2 -37.1 10.0 NA NA CL
CL
NA
 7.049
8.389
8.027
 N
CB
N
 CL
CL
NA
6e7r 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 ILE B:119 B:150 8.0 0.046 H -63.9 -43.2 8.0 0.046 0.0 CL
HOH
 7.167
5.237
 CG1
CD1
 CL
O
ILE D:119 D:150 8.0 0.046 H -68.2 -44.1 NA NA NA
6e7s 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 ILE B:119 B:150 4.0 0.023 H -64.0 -34.8 4.0 0.023 0.0 HOH
 4.933
 CD1
 O
ILE D:119 D:150 3.0 0.017 H -59.8 -40.0 NA NA NA
6e7t 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 ILE B:119 B:150 12.0 0.069 H -60.2 -46.3 12.0 0.069 0.0 CL
HOH
 6.724
5.444
 CG1
CD1
 CL
O
ILE D:119 D:150 5.0 0.029 H -60.5 -43.9 NA NA NA
6e7u 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 ILE B:119 B:150 15.0 0.086 H -61.7 -45.0 15.0 0.086 0.0 CL
HOH
 6.709
5.426
 CG1
CD1
 CL
O
ILE D:119 D:150 5.0 0.029 H -56.6 -45.5 NA NA NA
6e7v 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 ILE B:119 B:150 8.0 0.046 H -66.3 -43.1 8.0 0.046 0.0 CL
HOH
 6.991
5.082
 CG1
CD1
 CL
O
ILE D:119 D:150 14.0 0.08 H -68.5 -41.4 NA NA NA
6e7w 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 ILE B:119 B:150 13.0 0.074 H -63.8 -37.7 13.0 0.074 0.0 CL
HOH
 6.279
5.259
 CG1
CD1
 CL
O
ILE D:119 D:150 5.0 0.029 H -62.4 -41.3 NA NA NA
6e7x 2 Q00960 99.45 0.0 X-RAY
 2019-01-30 ILE B:119 B:150 8.0 0.046 H -65.0 -40.7 8.0 0.046 0.0 T97
CL
HOH
 9.619
6.592
5.185
 CD1
CG1
CD1
 C13
CL
O
ILE D:119 D:150 7.0 0.04 H -64.5 -41.6 NA NA NA
5tpz 2 Q00960 99.45 0.0 X-RAY
 2016-12-14 ILE B:119 D:150 9.0 NA H -47.0 -37.5 9.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13224-f1 1 Q13224 100.0 0.0 ILE A:150 A:150 15.0 0.086 H -53.7 -41.9