Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 109999257 . G A CCDS9131.1:NM_052845.3:c.487Cag>Tag_NP_443077.1:p.163Q>* Homo sapiens methylmalonic aciduria (cobalamin deficiency) cblB type (MMAB), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2idx 1 Q96EY8 99.49 4e-145 X-RAY
 2007-02-06 GLN A:109 A:163 83.0 0.461 T -89.5 -2.8 83.0 0.461 0.0 SO4
 5.869
 NE2
 O2
GLN B:109 B:163 86.0 0.478 T -95.5 -0.8 86.0 0.478 0.0 SO4
HOH
 6.473
2.579
 OE1
NE2
 O1
O
GLN C:109 C:163 82.0 0.456 T -107.7 3.3 82.0 0.456 0.0 SO4
HOH
 6.384
2.527
 OE1
OE1
 O4
O
6d5k 1 Q96EY8 99.49 4e-145 X-RAY
 2018-10-10 GLN A:109 A:163 87.0 0.483 T -101.4 -0.6 87.0 0.483 0.0 SO4
 6.462
 NE2
 O1
GLN B:109 B:163 87.0 0.483 T -108.3 -6.0 87.0 0.483 0.0 SO4
 6.872
 NE2
 O2
GLN C:109 C:163 80.0 0.444 T -99.0 -4.8 80.0 0.444 0.0 SO4
 5.861
 OE1
 O3
6d5x 1 Q96EY8 99.49 4e-145 X-RAY
 2018-10-10 GLN A:109 A:163 88.0 0.489 T -103.8 -6.1 88.0 0.489 0.0 SO4
 6.640
 NE2
 O1
GLN B:109 B:163 87.0 0.483 T -104.8 -10.8 87.0 0.483 0.0 SO4
HOH
 6.837
2.958
 OE1
NE2
 O4
O
GLN C:109 C:163 82.0 0.456 H -104.4 -11.2 82.0 0.456 0.0 SO4
 6.059
 NE2
 O2
7ruv 1 Q96EY8 98.98 2e-144 X-RAY
 2021-11-24 GLN A:109 A:163 82.0 0.456 T -104.4 -3.8 82.0 0.456 0.0 HOH
 2.860
 NE2
 O
GLN B:109 B:163 91.0 0.506 T -103.1 -7.1 NA NA NA
GLN C:109 C:163 80.0 0.444 T -109.3 -0.9 NA NA NA
GLN D:109 D:163 85.0 0.472 T -102.3 -2.3 NA NA NA
7rut 1 Q96EY8 98.98 2e-143 X-RAY
 2021-11-24 GLN A:109 E:163 81.0 0.45 T -104.9 9.1 81.0 0.45 0.0 HOH
 5.073
 N
 O
GLN B:109 C:163 82.0 0.456 T -103.3 9.2 NA NA NA
GLN C:109 F:163 99.0 0.55 T -127.0 -3.6 NA NA NA
GLN D:109 B:163 90.0 0.5 H -96.8 -2.2 NA NA NA
GLN E:109 A:163 88.0 0.489 T -99.6 -1.9 NA NA NA
GLN F:109 D:163 83.0 0.461 T -105.5 -2.7 83.0 0.461 0.0 HOH
 2.593
 OE1
 O
7ruu 1 Q96EY8 98.98 2e-143 X-RAY
 2021-11-24 GLN A:109 A:163 84.0 0.467 T -104.4 1.1 84.0 0.467 0.0 HOH
 2.996
 NE2
 O
GLN B:109 B:163 83.0 0.461 T -101.2 3.6 NA NA NA
GLN C:109 C:163 89.0 0.494 T -105.0 -2.6 NA NA NA
GLN D:109 D:163 87.0 0.483 T -100.8 -6.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96ey8-f1 1 Q96EY8 100.0 0.0 GLN A:163 A:163 80.0 0.444 T -101.1 -11.0