Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 15131079 | . | G | A | CCDS8672.1:NM_006205.2:c.133Gga>Aga_NP_006196.1:p.45G>R | Homo sapiens phosphodiesterase 6H (PDE6H), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6mzb | 3 | P04972 | 94.2 | 6e-45 |
EM |
2019-03-06 | GLY | C:49 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| GLY | D:49 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 7jsn | 4 | P04972 | 94.2 | 6e-45 |
EM |
2020-10-21 | GLY | E:49 | C:49 | 51.0 | 0.68 | 77.2 | 169.2 | 4.0 | 0.053 | 0.627 |
B:P23439:0.293 A:P11541:0.4 |
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| GLY | F:49 | D:49 | 47.0 | 0.627 | -131.0 | -166.5 | 16.0 | 0.213 | 0.414 |
B:P23439:0.413 A:P11541:0.04 |
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| 2ju4 | 1 | P04972 | 84.06 | 4e-40 |
NMR |
2007-10-16 | GLY | A:49 | A:49 | 34.0 | 0.453 | -162.3 | -100.6 | 34.0 | 0.453 | 0.0 |
RCY RCY RCY RCY |
4.789 2.492 9.643 9.379 |
HA3 C HA2 HA2 |
O1H H1S H1S O1H |
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| 1fqj | 3 | P04972 | 92.86 | 1e-24 |
X-RAY |
2001-02-28 | GLY | C:4 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q13956-f1 | 1 | Q13956 | 100.0 | 7e-58 | GLY | A:45 | A:45 | 44.0 | 0.587 | S | 110.9 | 155.1 | |
| af-p18545-f1 | 1 | P18545 | 94.2 | 3e-45 | GLY | A:49 | A:49 | 43.0 | 0.573 | -75.6 | 155.7 | ||