Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 15134372 . C A CCDS8672.1:NM_006205.2:c.214Ctg>Atg_NP_006196.1:p.72L>M Homo sapiens phosphodiesterase 6H (PDE6H), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6mzb 3 P04972 94.2 6e-45 EM
 2019-03-06 LEU C:76 C:76 165.0 0.971 S -76.8 -37.3 165.0 0.971 0.0
LEU D:76 D:76 171.0 1.0 S -68.9 -46.4 171.0 1.0 0.0
7jsn 4 P04972 94.2 6e-45 EM
 2020-10-21 LEU E:76 C:76 78.0 0.459 -73.1 153.0 56.0 0.329 0.13 C:P04695:0.129
LEU F:76 D:76 76.0 0.447 S -82.5 142.3 66.0 0.388 0.059 D:P04695:0.059
2ju4 1 P04972 84.06 4e-40 NMR
 2007-10-16 CYS A:76 A:76 66.0 0.489 57.4 125.0 66.0 0.489 0.0 RCY
RCY
RCY
 4.859
1.830
9.086
 HB2
SG
SG
 H1S
C1S
C1Z
1fqj 3 P04972 92.86 1e-24 X-RAY
 2001-02-28 LEU C:31 C:76 32.0 0.188 S -105.1 143.1 17.0 0.1 0.088 A:P04695+P10824:0.088
 HOH
 3.886
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13956-f1 1 Q13956 100.0 7e-58 LEU A:72 A:72 40.0 0.235 S -92.8 143.6
af-p18545-f1 1 P18545 94.2 3e-45 LEU A:76 A:76 37.0 0.218 S -94.2 141.7